RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GNPDA1P46926 289 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 RPL6Q02878 288 aaKnown RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SP140Q13342 867 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 RIPOR1Q6ZS17 1223 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 FRA10AC1Q70Z53 315 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 KBTBD2Q8IY47 623 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ULK2Q8IYT8 1036 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 SNX19Q92543 992 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 TIMM29Q9BSF4 260 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 NMUR2Q9GZQ4 415 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 CARS2Q9HA77 564 aaKnown RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 MARCOQ9UEW3 520 aaPredicted RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 EIF2B4Q9UI10 523 aaKnown RBP14.31□□□□□ -0.12
CXCL12-201ENST00000343575 KLF15Q9UIH9 416 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 ZDHHC2Q9UIJ5 367 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 PCTPQ9UKL6 214 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 KCNK6Q9Y257 313 aa14.31□□□□□ -0.12
CXCL12-201ENST00000343575 A0A1W2PR77 199 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM221A6NGB7 291 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 M0R296 226 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 E2F3O00716 465 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 TNFRSF10CO14798 259 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 SUPT7LO94864 414 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 C1orf105O95561 183 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 ENO2P09104 434 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-201ENST00000343575 MPSTP25325 297 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 CD27P26842 260 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 NUDT1P36639 197 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 GDF5P43026 501 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 RABIFP47224 123 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 CDKL1Q00532 357 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 PLOD1Q02809 727 aaPredicted RBP14.3□□□□□ -0.12
CXCL12-201ENST00000343575 RPA4Q13156 261 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 PCBP2Q15366 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
CXCL12-201ENST00000343575 ALG11Q2TAA5 492 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 USP39Q53GS9 565 aaKnown RBP14.3□□□□□ -0.12
CXCL12-201ENST00000343575 C1orf146Q5VVC0 180 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 MAVSQ7Z434 540 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 GALNT13Q8IUC8 556 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM105Q8N8V8 129 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 CCL4L1Q8NHW4 92 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 MOSPD1Q9UJG1 213 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 ZNF225Q9UK10 706 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 PSMD13Q9UNM6 376 aa14.3□□□□□ -0.12
CXCL12-201ENST00000343575 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CCDC163A0A0D9SF12 145 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SPTY2D1-AS1A0A0U1RR47 76 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 TOR1BO14657 336 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 HSPA4LO95757 839 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SERPINA6P08185 405 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 UBTFL6P0CB48 400 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 KITP10721 976 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 RPL10P27635 214 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 BDKRB1P46663 353 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 FNTBP49356 437 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CDC16Q13042 620 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 EIF2B5Q13144 721 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 MED21Q13503 144 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 FZD2Q14332 565 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CDKL4Q5MAI5 379 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SULT1C3Q6IMI6 304 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 LAYNQ6UX15 382 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 PDZD3Q86UT5 571 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CRLF3Q8IUI8 442 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 TMEFF1Q8IYR6 380 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 ALDH16A1Q8IZ83 802 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 RBM15BQ8NDT2 890 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 PIWIL2Q8TC59 973 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SREK1Q8WXA9 508 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 HSPA12BQ96MM6 686 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 ARL15Q9NXU5 204 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CIDEBQ9UHD4 219 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 GPSM3Q9Y4H4 160 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM233B4DJY2 109 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 PEX1O43933 1283 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SNX2O60749 519 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 THEGLP0DJG4 465 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 KELP23276 732 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 HTR1BP28222 390 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 GGT5P36269 586 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SERPINB5P36952 375 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 HSPA7P48741 367 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 THOP1P52888 689 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SRP54P61011 504 aaKnown RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 SH3BP2P78314 561 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 GALNT1Q10472 559 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 GRB7Q14451 532 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 CFAP157Q5JU67 520 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 PDSS2Q86YH6 399 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 FBXO15Q8NCQ5 510 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 MCOLN3Q8TDD5 553 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 UBTD2Q8WUN7 234 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 BTBD9Q96Q07 612 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 OR2M4Q96R27 311 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 TMEM168Q9H0V1 697 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 TCEAL2Q9H3H9 227 aaPredicted RBP14.29□□□□□ -0.12
CXCL12-201ENST00000343575 S100A14Q9HCY8 104 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 KLQ9UEF7 1012 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 RAP2CQ9Y3L5 183 aa14.29□□□□□ -0.12
CXCL12-201ENST00000343575 EML2O95834 649 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms