RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 IP6K3Q96PC2 410 aa17.09■□□□□ 0.33
HDDC3-201ENST00000330334 GBP5Q96PP8 586 aa17.09■□□□□ 0.33
HDDC3-201ENST00000330334 SPRTNQ9H040 489 aaPredicted RBP17.09■□□□□ 0.33
HDDC3-201ENST00000330334 ACSS2Q9NR19 701 aa17.09■□□□□ 0.33
HDDC3-201ENST00000330334 INTS7Q9NVH2 962 aaKnown RBP17.09■□□□□ 0.33
HDDC3-201ENST00000330334 SYBUQ9NX95 663 aa17.09■□□□□ 0.33
HDDC3-201ENST00000330334 TCRBV7S3A2A0A539 114 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 PRICKLE3O43900 615 aaPredicted RBP17.08■□□□□ 0.32
HDDC3-201ENST00000330334 TMEM63AO94886 807 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 C1orf105O95561 183 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 ESR1P03372 595 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 MLNP12872 115 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 ATP5DP30049 168 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 CCNFP41002 786 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 DCDP81605 110 aaKnown RBP17.08■□□□□ 0.32
HDDC3-201ENST00000330334 SSPNQ14714 243 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 KIAA0930Q6ICG6 404 aaPredicted RBP17.08■□□□□ 0.32
HDDC3-201ENST00000330334 ZBTB2Q8N680 514 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 CFAP61Q8NHU2 1237 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 LPGAT1Q92604 370 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 ZUFSPQ96AP4 578 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 SLC25A23Q9BV35 468 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 EURLQ9NYK6 297 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 SLC39A10Q9ULF5 831 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 VPS9D1Q9Y2B5 631 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 KLK4Q9Y5K2 254 aa17.08■□□□□ 0.32
HDDC3-201ENST00000330334 COL12A1Q99715 3063 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 ARGFXA6NJG6 315 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 TARM1B6A8C7 271 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 ONECUT2O95948 504 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 PDGFAP04085 211 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 PAMP19021 973 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 NR1D1P20393 614 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 OGNP20774 298 aaKnown RBP17.07■□□□□ 0.32
HDDC3-201ENST00000330334 MAGP20916 626 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 PTGIRP43119 386 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 GCGRP47871 477 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 CCL11P51671 97 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 PGDP52209 483 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 RRADP55042 308 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 GPS1Q13098 491 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 GBX1Q14549 363 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 CYP1B1Q16678 543 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 CTSL3PQ5NE16 218 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 CPZQ66K79 652 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 CAND1Q86VP6 1230 aaKnown RBP17.07■□□□□ 0.32
HDDC3-201ENST00000330334 HPS6Q86YV9 775 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 MCATQ8IVS2 390 aaKnown RBP17.07■□□□□ 0.32
HDDC3-201ENST00000330334 RAB42Q8N4Z0 105 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 LMNTD1Q8N9Z9 388 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 MCUQ8NE86 351 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 MAGEC3Q8TD91 643 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 DLG3Q92796 817 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 MAGOHBQ96A72 148 aaKnown RBP17.07■□□□□ 0.32
HDDC3-201ENST00000330334 NACC2Q96BF6 587 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 FOPNLQ96NB1 174 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
HDDC3-201ENST00000330334 RELNP78509 3460 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 HECTD1Q9ULT8 2610 aa17.07■□□□□ 0.32
HDDC3-201ENST00000330334 FAM237BA0A1B0GVD1 139 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 MATN4O95460 622 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 KRT14P02533 472 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 CBSLP0DN79 551 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 CBSP35520 551 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 CD97P48960 835 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 ARSFP54793 590 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 EIF3BP55884 814 aaKnown RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 SF1Q15637 639 aaKnown RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 TRIP13Q15645 432 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 DEFB110Q30KQ9 67 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 NKAIN1Q4KMZ8 207 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 ZC3H12BQ5HYM0 836 aaKnown RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 YOD1Q5VVQ6 348 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 NEPROQ6NW34 567 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 TTC27Q6P3X3 843 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 CES3Q6UWW8 571 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 RAB43Q86YS6 212 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 ZNF655Q8N720 491 aaPredicted RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 ZNF285Q96NJ3 590 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 NDC1Q9BTX1 674 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
HDDC3-201ENST00000330334 TXLNGQ9NUQ3 528 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 NEU2Q9Y3R4 380 aa17.06■□□□□ 0.32
HDDC3-201ENST00000330334 SDR42E2A6NKP2 422 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 AVILO75366 819 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 IGHEP01854 428 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 FMO4P31512 558 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 TCTE1Q5JU00 501 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 FAM69BQ5VUD6 431 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 MRPL14Q6P1L8 145 aaKnown RBP17.05■□□□□ 0.32
HDDC3-201ENST00000330334 FIGLAQ6QHK4 219 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 CILP2Q8IUL8 1156 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 OTUD6BQ8N6M0 293 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 OR2Y1Q8NGV0 311 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 MIB2Q96AX9 1013 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 PTERQ96BW5 349 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 IL17FQ96PD4 163 aa17.05■□□□□ 0.32
HDDC3-201ENST00000330334 INTS10Q9NVR2 710 aaKnown RBP17.05■□□□□ 0.32
HDDC3-201ENST00000330334 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.05■□□□□ 0.32
HDDC3-201ENST00000330334 IFT80Q9P2H3 777 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms