RNA–Protein interactions for RNA: ENST00000636930.1

ARID1B-220, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARID1B, Length 8,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-220ENST00000636930 C16orf45Q96MC5 204 aaPredicted RBP23.04■■□□□ 1.28
ARID1B-220ENST00000636930 ARFGAP3Q9NP61 516 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 ZC4H2Q9NQZ6 224 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 PRIMPOLQ96LW4 560 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 SLC3A2P08195 630 aaKnown RBP23.04■■□□□ 1.28
ARID1B-220ENST00000636930 CEP128Q6ZU80 1094 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
ARID1B-220ENST00000636930 ATP11AP98196 1134 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 VCX3BQ9H321 246 aa23.04■■□□□ 1.28
ARID1B-220ENST00000636930 API5Q9BZZ5 524 aaKnown RBP23.03■■□□□ 1.28
ARID1B-220ENST00000636930 ZBTB16Q05516 673 aa23.03■■□□□ 1.28
ARID1B-220ENST00000636930 EVA1CP58658 441 aa23.03■■□□□ 1.28
ARID1B-220ENST00000636930 CCDC114Q96M63 670 aa23.03■■□□□ 1.28
ARID1B-220ENST00000636930 CCDC110Q8TBZ0 833 aa23.03■■□□□ 1.28
ARID1B-220ENST00000636930 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
ARID1B-220ENST00000636930 CKAP4Q07065 602 aaKnown RBP23.02■■□□□ 1.28
ARID1B-220ENST00000636930 SPATA32Q96LK8 384 aa23.02■■□□□ 1.28
ARID1B-220ENST00000636930 ALS2CR12Q96Q35 445 aa23.02■■□□□ 1.28
ARID1B-220ENST00000636930 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
ARID1B-220ENST00000636930 NEMFO60524 1076 aa23.02■■□□□ 1.28
ARID1B-220ENST00000636930 MAP4K4O95819 1239 aaPredicted RBP23.02■■□□□ 1.28
ARID1B-220ENST00000636930 LACTBP83111 547 aaPredicted RBP23.02■■□□□ 1.28
ARID1B-220ENST00000636930 CEP135Q66GS9 1140 aa23.02■■□□□ 1.27
ARID1B-220ENST00000636930 ERCC3P19447 782 aa23.01■■□□□ 1.27
ARID1B-220ENST00000636930 RIPK4P57078 832 aa23.01■■□□□ 1.27
ARID1B-220ENST00000636930 CLNS1AP54105 237 aaKnown RBP23.01■■□□□ 1.27
ARID1B-220ENST00000636930 CACNA2D3Q8IZS8 1091 aa23.01■■□□□ 1.27
ARID1B-220ENST00000636930 PPM1FP49593 454 aaPredicted RBP23.01■■□□□ 1.27
ARID1B-220ENST00000636930 HMGB1P1B2RPK0 211 aaPredicted RBP23.01■■□□□ 1.27
ARID1B-220ENST00000636930 CAPN2P17655 700 aa23.01■■□□□ 1.27
ARID1B-220ENST00000636930 CTNNA2P26232 953 aa23.01■■□□□ 1.27
ARID1B-220ENST00000636930 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
ARID1B-220ENST00000636930 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.276e-7■■■■□ 23.7
ARID1B-220ENST00000636930 ATRIPQ8WXE1 791 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 MCM5P33992 734 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 PCK1P35558 622 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 STMN4Q9H169 189 aaPredicted RBP23■■□□□ 1.27
ARID1B-220ENST00000636930 FHOD3Q2V2M9 1422 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 SMARCA2P51531 1590 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 SETDB1Q15047 1291 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 TRIM22Q8IYM9 498 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 MTMR7Q9Y216 660 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 MAP3K7CLP57077 242 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 STMN2Q93045 179 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 TOP1P11387 765 aaKnown RBP23■■□□□ 1.27
ARID1B-220ENST00000636930 TTC14Q96N46 770 aa23■■□□□ 1.27
ARID1B-220ENST00000636930 USH1CQ9Y6N9 552 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
ARID1B-220ENST00000636930 FMNL3Q8IVF7 1028 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 WIZO95785 1651 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 CHMP2AO43633 222 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 WDR63Q8IWG1 891 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 PABPN1LA6NDY0 278 aaKnown RBP22.99■■□□□ 1.27
ARID1B-220ENST00000636930 FKBP15Q5T1M5 1219 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 CACNA2D4Q7Z3S7 1137 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 BANK1Q8NDB2 785 aa22.99■■□□□ 1.27
ARID1B-220ENST00000636930 SYCE3A1L190 88 aa22.98■■□□□ 1.27
ARID1B-220ENST00000636930 DDX27Q96GQ7 796 aaKnown RBP22.98■■□□□ 1.27
ARID1B-220ENST00000636930 CCDC50Q8IVM0 306 aa22.98■■□□□ 1.27
ARID1B-220ENST00000636930 IQCGQ9H095 443 aaKnown RBP22.98■■□□□ 1.27
ARID1B-220ENST00000636930 DIAPH1O60610 1272 aaKnown RBP22.98■■□□□ 1.27
ARID1B-220ENST00000636930 K7ELQ4 463 aaPredicted RBP22.98■■□□□ 1.27
ARID1B-220ENST00000636930 WHAMMP3Q1A5X7 153 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 OPA1O60313 960 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 MGEA5O60502 916 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 GBP1P32455 592 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 NOL7Q9UMY1 257 aaKnown RBP22.97■■□□□ 1.27
ARID1B-220ENST00000636930 GSDMDP57764 484 aa22.97■■□□□ 1.27
ARID1B-220ENST00000636930 SATB1Q01826 763 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 DRC1Q96MC2 740 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 DHX57Q6P158 1386 aaKnown RBP22.96■■□□□ 1.27
ARID1B-220ENST00000636930 MACROD2A1Z1Q3 448 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 SH3BGRP55822 239 aaPredicted RBP22.96■■□□□ 1.27
ARID1B-220ENST00000636930 MIER3Q7Z3K6 550 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 PSMD1Q99460 953 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 AP1ARQ63HQ0 302 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 LARP1BQ659C4 914 aaKnown RBP22.96■■□□□ 1.27
ARID1B-220ENST00000636930 ZNF365Q70YC5 407 aa22.96■■□□□ 1.27
ARID1B-220ENST00000636930 SSX2IPQ9Y2D8 614 aa22.95■■□□□ 1.27
ARID1B-220ENST00000636930 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.27
ARID1B-220ENST00000636930 MCM4P33991 863 aa22.95■■□□□ 1.26
ARID1B-220ENST00000636930 RUNDC1Q96C34 613 aa22.95■■□□□ 1.26
ARID1B-220ENST00000636930 SNW1Q13573 536 aaKnown RBP22.95■■□□□ 1.26
ARID1B-220ENST00000636930 TMCO4Q5TGY1 634 aa22.95■■□□□ 1.26
ARID1B-220ENST00000636930 VCXQ9H320 206 aa22.95■■□□□ 1.26
ARID1B-220ENST00000636930 BUB1BO60566 1050 aaPredicted RBP22.94■■□□□ 1.26
ARID1B-220ENST00000636930 FGFR1OPO95684 399 aaKnown RBP22.94■■□□□ 1.26
ARID1B-220ENST00000636930 TRMT1Q9NXH9 659 aaKnown RBP22.94■■□□□ 1.26
ARID1B-220ENST00000636930 CCDC171Q6TFL3 1326 aa22.94■■□□□ 1.26
ARID1B-220ENST00000636930 RAPGEF2Q9Y4G8 1499 aa22.93■■□□□ 1.26
ARID1B-220ENST00000636930 NUP88Q99567 741 aaPredicted RBP22.93■■□□□ 1.26
ARID1B-220ENST00000636930 CYP46A1Q9Y6A2 500 aa22.93■■□□□ 1.26
ARID1B-220ENST00000636930 CCDC57Q2TAC2 916 aa22.93■■□□□ 1.26
ARID1B-220ENST00000636930 PRPF31Q8WWY3 499 aaKnown RBP22.93■■□□□ 1.26
ARID1B-220ENST00000636930 EPSTI1Q96J88 318 aa22.93■■□□□ 1.26
ARID1B-220ENST00000636930 FERMT1Q9BQL6 677 aa22.93■■□□□ 1.26
ARID1B-220ENST00000636930 AIMP1Q12904 312 aaKnown RBP22.93■■□□□ 1.26
ARID1B-220ENST00000636930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.93■■□□□ 1.263e-6■□□□□ 11.2
ARID1B-220ENST00000636930 PPP1R12CQ9BZL4 782 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms