RNA–Protein interactions for RNA: ENST00000636930.1

ARID1B-220, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARID1B, Length 8,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-220ENST00000636930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.31■■□□□ 1.482e-6■■■■■ 91
ARID1B-220ENST00000636930 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.05■□□□□ 0.85e-6■■■■■ 81.8
ARID1B-220ENST00000636930 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.76■■□□□ 1.071e-6■■■■■ 77.6
ARID1B-220ENST00000636930 SF3B1O75533 1304 aaKnown RBP eCLIP20.84■□□□□ 0.932e-6■■■■■ 70.5
ARID1B-220ENST00000636930 AARSP49588 968 aaKnown RBP eCLIP21.49■■□□□ 1.033e-6■■■■■ 61.8
ARID1B-220ENST00000636930 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■■ 51.6
ARID1B-220ENST00000636930 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.38■□□□□ 0.854e-7■■■■■ 51.3
ARID1B-220ENST00000636930 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.723e-14■■■■■ 50.7
ARID1B-220ENST00000636930 ILF3Q12906 894 aaKnown RBP eCLIP20.33■□□□□ 0.841e-14■■■■■ 48.8
ARID1B-220ENST00000636930 HNRNPKP61978 463 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■■■■■ 43.9
ARID1B-220ENST00000636930 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.59■■□□□ 1.375e-7■■■■■ 42.9
ARID1B-220ENST00000636930 PABPC4Q13310 644 aaKnown RBP eCLIP20.62■□□□□ 0.891e-6■■■■■ 40.1
ARID1B-220ENST00000636930 PRPF4O43172 522 aaKnown RBP eCLIP20.96■□□□□ 0.952e-11■■■■■ 38.4
ARID1B-220ENST00000636930 PCBP2Q15366 365 aaKnown RBP eCLIP18.95■□□□□ 0.625e-7■■■■■ 37.7
ARID1B-220ENST00000636930 ZRANB2O95218 330 aaKnown RBP eCLIP22.51■■□□□ 1.197e-6■■■■■ 37.3
ARID1B-220ENST00000636930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.042e-6■■■■■ 36.9
ARID1B-220ENST00000636930 DDX6P26196 483 aaKnown RBP eCLIP19.85■□□□□ 0.779e-7■■■■■ 36.6
ARID1B-220ENST00000636930 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.86■■□□□ 1.252e-6■■■■■ 35.5
ARID1B-220ENST00000636930 RBM15Q96T37 977 aaKnown RBP eCLIP20.54■□□□□ 0.886e-7■■■■■ 33.2
ARID1B-220ENST00000636930 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.76■□□□□ 0.592e-7■■■■■ 30.3
ARID1B-220ENST00000636930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.95■□□□□ 0.942e-6■■■■■ 29.8
ARID1B-220ENST00000636930 PTBP1P26599 531 aaKnown RBP eCLIP18.71■□□□□ 0.595e-7■■■■■ 29.7
ARID1B-220ENST00000636930 QKIQ96PU8 341 aaKnown RBP eCLIP21.51■■□□□ 1.037e-7■■■■■ 29.6
ARID1B-220ENST00000636930 HNRNPMP52272 730 aaKnown RBP eCLIP23.17■■□□□ 1.36e-7■■■■■ 27.1
ARID1B-220ENST00000636930 BCCIPQ9P287 314 aaKnown RBP eCLIP24.33■■□□□ 1.492e-8■■■■■ 27
ARID1B-220ENST00000636930 RBFOX2O43251 390 aaKnown RBP eCLIP17.98■□□□□ 0.471e-7■■■■□ 25
ARID1B-220ENST00000636930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.69■□□□□ 0.268e-7■■■■□ 24.3
ARID1B-220ENST00000636930 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.082e-6■■■■□ 24
ARID1B-220ENST00000636930 MATR3P43243 847 aaKnown RBP eCLIP23■■□□□ 1.276e-7■■■■□ 23.7
ARID1B-220ENST00000636930 GTF2F1P35269 517 aaKnown RBP eCLIP23.47■■□□□ 1.355e-14■■■■□ 22.8
ARID1B-220ENST00000636930 FXR2P51116 673 aaKnown RBP eCLIP19.7■□□□□ 0.742e-7■■■■□ 22.8
ARID1B-220ENST00000636930 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.25■□□□□ 0.673e-7■■■■□ 22.3
ARID1B-220ENST00000636930 PCBP1Q15365 356 aaKnown RBP eCLIP18.98■□□□□ 0.631e-6■■■■□ 22.3
ARID1B-220ENST00000636930 FMR1Q06787 632 aaKnown RBP eCLIP19.89■□□□□ 0.781e-6■■■■□ 21.6
ARID1B-220ENST00000636930 LSM11P83369 360 aaKnown RBP eCLIP18.27■□□□□ 0.522e-8■■■■□ 20.3
ARID1B-220ENST00000636930 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.37■□□□□ 0.691e-6■■■■□ 20.1
ARID1B-220ENST00000636930 CSTF2P33240 577 aaKnown RBP eCLIP19.61■□□□□ 0.731e-6■■■■□ 19.8
ARID1B-220ENST00000636930 METAP2P50579 478 aaKnown RBP eCLIP22.01■■□□□ 1.115e-6■■■■□ 19.7
ARID1B-220ENST00000636930 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.75■■□□□ 1.231e-6■■■□□ 19.1
ARID1B-220ENST00000636930 NONOQ15233 471 aaKnown RBP eCLIP21.89■■□□□ 1.12e-6■■■□□ 18.7
ARID1B-220ENST00000636930 HNRNPCP07910 306 aaKnown RBP eCLIP22.14■■□□□ 1.132e-6■■■□□ 18.7
ARID1B-220ENST00000636930 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.527e-7■■■□□ 18.6
ARID1B-220ENST00000636930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.51■□□□□ 0.878e-6■■■□□ 18.5
ARID1B-220ENST00000636930 SF3B4Q15427 424 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■■□□ 18.3
ARID1B-220ENST00000636930 TARDBPQ13148 414 aaKnown RBP eCLIP19.5■□□□□ 0.711e-6■■■□□ 18.1
ARID1B-220ENST00000636930 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.17■□□□□ 0.662e-6■■■□□ 18
ARID1B-220ENST00000636930 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■■■□□ 17.3
ARID1B-220ENST00000636930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.812e-6■■■□□ 16.2
ARID1B-220ENST00000636930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■■□□ 16
ARID1B-220ENST00000636930 HLTFQ14527 1009 aaKnown RBP eCLIP23.15■■□□□ 1.36e-6■■■□□ 15.9
ARID1B-220ENST00000636930 YBX3P16989 372 aaKnown RBP eCLIP19.47■□□□□ 0.712e-6■■■□□ 15.9
ARID1B-220ENST00000636930 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.3■□□□□ 0.688e-7■■■□□ 15.6
ARID1B-220ENST00000636930 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.48■□□□□ 0.717e-7■■■□□ 15.3
ARID1B-220ENST00000636930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.56■■□□□ 1.21e-6■■■□□ 15.2
ARID1B-220ENST00000636930 TIA1P31483 386 aaKnown RBP eCLIP18.55■□□□□ 0.564e-6■■■□□ 14.9
ARID1B-220ENST00000636930 TRA2AQ13595 282 aaKnown RBP eCLIP16.82■□□□□ 0.285e-6■■■□□ 14.9
ARID1B-220ENST00000636930 U2AF2P26368 475 aaKnown RBP eCLIP22.28■■□□□ 1.163e-7■■□□□ 14.5
ARID1B-220ENST00000636930 EIF3HO15372 352 aaKnown RBP eCLIP21.07■□□□□ 0.961e-7■■□□□ 14.4
ARID1B-220ENST00000636930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.621e-6■■□□□ 13.7
ARID1B-220ENST00000636930 POLR2GP62487 172 aaKnown RBP eCLIP17.66■□□□□ 0.421e-6■■□□□ 13.6
ARID1B-220ENST00000636930 SFPQP23246 707 aaKnown RBP eCLIP23.16■■□□□ 1.39e-7■■□□□ 13.5
ARID1B-220ENST00000636930 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.66■□□□□ 0.422e-8■■□□□ 13
ARID1B-220ENST00000636930 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.01■□□□□ 0.792e-7■■□□□ 12.1
ARID1B-220ENST00000636930 FTOQ9C0B1 505 aaKnown RBP eCLIP21.35■■□□□ 1.018e-10■□□□□ 11.2
ARID1B-220ENST00000636930 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.93■■□□□ 1.263e-6■□□□□ 11.2
ARID1B-220ENST00000636930 U2AF1Q01081 240 aaKnown RBP eCLIP23.82■■□□□ 1.41e-8■□□□□ 11
ARID1B-220ENST00000636930 RBM22Q9NW64 420 aaKnown RBP eCLIP19.72■□□□□ 0.752e-8■□□□□ 10.8
ARID1B-220ENST00000636930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.77■□□□□ 0.768e-6■□□□□ 10.5
ARID1B-220ENST00000636930 PPIGQ13427 754 aaKnown RBP eCLIP19.57■□□□□ 0.721e-6■□□□□ 10.3
ARID1B-220ENST00000636930 EIF3DO15371 548 aaKnown RBP eCLIP21.42■■□□□ 1.022e-6■□□□□ 10.2
ARID1B-220ENST00000636930 ZNF622Q969S3 477 aaKnown RBP eCLIP22.65■■□□□ 1.221e-6■□□□□ 10.1
ARID1B-220ENST00000636930 G3BP1Q13283 466 aaKnown RBP eCLIP23.17■■□□□ 1.34e-8■□□□□ 9.8
ARID1B-220ENST00000636930 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.96■□□□□ 0.953e-7■□□□□ 9.1
ARID1B-220ENST00000636930 FUSP35637 526 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■□□□□ 9
ARID1B-220ENST00000636930 PUM1Q14671 1186 aaKnown RBP eCLIP19.67■□□□□ 0.745e-6■□□□□ 8.5
ARID1B-220ENST00000636930 RBM5P52756 815 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■□□□□ 8
Retrieved 76 of 76 RNA–protein pairs in 17.6 ms