RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TAS1R3Q7RTX0 852 aa9.17□□□□□ -0.94
HDDC2-207ENST00000608532 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
HDDC2-207ENST00000608532 GAS2L1Q99501 681 aaPredicted RBP9.17□□□□□ -0.94
HDDC2-207ENST00000608532 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
HDDC2-207ENST00000608532 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
HDDC2-207ENST00000608532 HRH3Q9Y5N1 445 aa9.17□□□□□ -0.94
HDDC2-207ENST00000608532 WASLO00401 505 aaPredicted RBP9.16□□□□□ -0.94
HDDC2-207ENST00000608532 ITGA6P23229 1130 aa9.16□□□□□ -0.94
HDDC2-207ENST00000608532 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
HDDC2-207ENST00000608532 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
HDDC2-207ENST00000608532 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
HDDC2-207ENST00000608532 TMEM229AB2RXF0 380 aa9.15□□□□□ -0.94
HDDC2-207ENST00000608532 SPATA31C2B4DYI2 1134 aa9.15□□□□□ -0.94
HDDC2-207ENST00000608532 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDDC2-207ENST00000608532 MAFBQ9Y5Q3 323 aaPredicted RBP9.15□□□□□ -0.94
HDDC2-207ENST00000608532 LMOD1P29536 600 aaPredicted RBP9.14□□□□□ -0.95
HDDC2-207ENST00000608532 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
HDDC2-207ENST00000608532 OGFOD1Q8N543 542 aa9.14□□□□□ -0.95
HDDC2-207ENST00000608532 TPCN2Q8NHX9 752 aa9.14□□□□□ -0.95
HDDC2-207ENST00000608532 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
HDDC2-207ENST00000608532 SMTNP53814 917 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 CLDN10P78369 228 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 C4orf17Q53FE4 359 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
HDDC2-207ENST00000608532 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 CUEDC1Q9NWM3 386 aaPredicted RBP9.13□□□□□ -0.95
HDDC2-207ENST00000608532 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
HDDC2-207ENST00000608532 BACH1O14867 736 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 RASA1P20936 1047 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 SV2AQ7L0J3 742 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
HDDC2-207ENST00000608532 RHBDD1Q8TEB9 315 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 GPAMQ9HCL2 828 aa9.12□□□□□ -0.95
HDDC2-207ENST00000608532 RBM19Q9Y4C8 960 aaKnown RBP9.12□□□□□ -0.95
HDDC2-207ENST00000608532 A6NJY4 79 aa9.11□□□□□ -0.95
HDDC2-207ENST00000608532 ZBTB7BO15156 539 aaPredicted RBP9.11□□□□□ -0.95
HDDC2-207ENST00000608532 VSIG8P0DPA2 414 aa9.11□□□□□ -0.95
HDDC2-207ENST00000608532 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
HDDC2-207ENST00000608532 WDR44Q5JSH3 913 aa9.11□□□□□ -0.95
HDDC2-207ENST00000608532 GPR161Q8N6U8 529 aaKnown RBP9.11□□□□□ -0.95
HDDC2-207ENST00000608532 RFX1P22670 979 aa9.1□□□□□ -0.95
HDDC2-207ENST00000608532 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
HDDC2-207ENST00000608532 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
HDDC2-207ENST00000608532 WIPF1O43516 503 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 F11P03951 625 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 TNS4Q8IZW8 715 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
HDDC2-207ENST00000608532 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 NIFKQ9BYG3 293 aaKnown RBP9.09□□□□□ -0.95
HDDC2-207ENST00000608532 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 USP3Q9Y6I4 520 aa9.09□□□□□ -0.95
HDDC2-207ENST00000608532 ARID3CA6NKF2 412 aa9.08□□□□□ -0.96
HDDC2-207ENST00000608532 SFI1A8K8P3 1242 aa9.08□□□□□ -0.96
HDDC2-207ENST00000608532 DBN1Q16643 649 aa9.08□□□□□ -0.96
HDDC2-207ENST00000608532 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
HDDC2-207ENST00000608532 VRTNQ9H8Y1 702 aa9.08□□□□□ -0.96
HDDC2-207ENST00000608532 A0A1B0GTH6 734 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 H7C1W4 665 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 CDK2AP1O14519 115 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 MSX1P28360 303 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 TRIM22Q8IYM9 498 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 ZNF837Q96EG3 531 aaPredicted RBP9.07□□□□□ -0.96
HDDC2-207ENST00000608532 CNTNAP3BQ96NU0 1288 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 COL25A1Q9BXS0 654 aaPredicted RBP9.07□□□□□ -0.96
HDDC2-207ENST00000608532 CNTNAP3Q9BZ76 1288 aa9.07□□□□□ -0.96
HDDC2-207ENST00000608532 GPR25O00155 361 aa9.06□□□□□ -0.96
HDDC2-207ENST00000608532 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-207ENST00000608532 MTFR1Q15390 333 aa9.06□□□□□ -0.96
HDDC2-207ENST00000608532 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-207ENST00000608532 CFAP70Q5T0N1 1121 aa9.06□□□□□ -0.96
HDDC2-207ENST00000608532 KANK4Q5T7N3 995 aaPredicted RBP9.06□□□□□ -0.96
HDDC2-207ENST00000608532 GTPBP3Q969Y2 492 aaKnown RBP9.06□□□□□ -0.96
HDDC2-207ENST00000608532 NUCKS1Q9H1E3 243 aaKnown RBP9.06□□□□□ -0.96
HDDC2-207ENST00000608532 RUBCNLQ9H714 662 aa9.06□□□□□ -0.96
HDDC2-207ENST00000608532 PARP3Q9Y6F1 533 aa9.06□□□□□ -0.96
HDDC2-207ENST00000608532 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
HDDC2-207ENST00000608532 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
HDDC2-207ENST00000608532 SLC9A9Q8IVB4 645 aa9.05□□□□□ -0.96
HDDC2-207ENST00000608532 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
HDDC2-207ENST00000608532 TSEN2Q8NCE0 465 aaKnown RBP9.05□□□□□ -0.96
HDDC2-207ENST00000608532 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
HDDC2-207ENST00000608532 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
HDDC2-207ENST00000608532 SIX5Q8N196 739 aa9.04□□□□□ -0.96
HDDC2-207ENST00000608532 CCDC97Q96F63 343 aaPredicted RBP9.04□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L15C9J2P7 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L10C9JJH3 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L13C9JLJ4 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L11C9JVI0 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L21D6R901 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L18D6R9N7 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L22D6RA61 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L17D6RBQ6 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L19D6RCP7 530 aa9.03□□□□□ -0.96
HDDC2-207ENST00000608532 USP17L20D6RJB6 530 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms