RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
UBR1-205ENST00000564540 LZTS3O60299 673 aaPredicted RBP10.18□□□□□ -0.78
UBR1-205ENST00000564540 GTF2IP78347 998 aa10.18□□□□□ -0.78
UBR1-205ENST00000564540 KRT76Q01546 638 aa10.18□□□□□ -0.78
UBR1-205ENST00000564540 FHDC1Q9C0D6 1143 aaPredicted RBP10.18□□□□□ -0.78
UBR1-205ENST00000564540 PLEKHM2Q8IWE5 1019 aa10.17□□□□□ -0.78
UBR1-205ENST00000564540 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
UBR1-205ENST00000564540 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
UBR1-205ENST00000564540 TMEM229AB2RXF0 380 aa10.16□□□□□ -0.78
UBR1-205ENST00000564540 INHAP05111 366 aa10.16□□□□□ -0.78
UBR1-205ENST00000564540 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
UBR1-205ENST00000564540 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
UBR1-205ENST00000564540 ZSCAN10Q96SZ4 725 aaPredicted RBP10.16□□□□□ -0.78
UBR1-205ENST00000564540 SERTAD1Q9UHV2 236 aa10.16□□□□□ -0.78
UBR1-205ENST00000564540 PSME1Q06323 249 aa10.15□□□□□ -0.78
UBR1-205ENST00000564540 TLR1Q15399 786 aa10.15□□□□□ -0.78
UBR1-205ENST00000564540 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
UBR1-205ENST00000564540 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 IGHA1P01876 353 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 ITGA6P23229 1130 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 CLDN10P78369 228 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 PPP1R12CQ9BZL4 782 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
UBR1-205ENST00000564540 KIAA1024Q9UPX6 916 aa10.14□□□□□ -0.79
UBR1-205ENST00000564540 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
UBR1-205ENST00000564540 PHKA2P46019 1235 aa10.13□□□□□ -0.79
UBR1-205ENST00000564540 TMEM214Q6NUQ4 689 aaKnown RBP10.13□□□□□ -0.79
UBR1-205ENST00000564540 TAS1R3Q7RTX0 852 aa10.13□□□□□ -0.79
UBR1-205ENST00000564540 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
UBR1-205ENST00000564540 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
UBR1-205ENST00000564540 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
UBR1-205ENST00000564540 CUEDC1Q9NWM3 386 aaPredicted RBP10.12□□□□□ -0.79
UBR1-205ENST00000564540 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
UBR1-205ENST00000564540 SMTNP53814 917 aa10.11□□□□□ -0.79
UBR1-205ENST00000564540 TRIM50Q86XT4 487 aa10.11□□□□□ -0.79
UBR1-205ENST00000564540 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
UBR1-205ENST00000564540 TIMMDC1Q9NPL8 285 aa10.11□□□□□ -0.79
UBR1-205ENST00000564540 CDC14CA4D256 554 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 C4orf17Q53FE4 359 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
UBR1-205ENST00000564540 VWA5B2Q8N398 1253 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
UBR1-205ENST00000564540 CNTNAP3Q9BZ76 1288 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 ZNF358Q9NW07 568 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 DYRK1BQ9Y463 629 aa10.1□□□□□ -0.79
UBR1-205ENST00000564540 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 LMOD1P29536 600 aaPredicted RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 WDR44Q5JSH3 913 aa10.09□□□□□ -0.79
UBR1-205ENST00000564540 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
UBR1-205ENST00000564540 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 RIPOR1Q6ZS17 1223 aa10.09□□□□□ -0.79
UBR1-205ENST00000564540 NANOS1Q8WY41 292 aaKnown RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 ZNF594Q96JF6 807 aaPredicted RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 SLC4A9Q96Q91 983 aa10.09□□□□□ -0.79
UBR1-205ENST00000564540 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
UBR1-205ENST00000564540 USP3Q9Y6I4 520 aa10.09□□□□□ -0.79
UBR1-205ENST00000564540 ATP1A2P50993 1020 aa10.08□□□□□ -0.8
UBR1-205ENST00000564540 CCDC102BQ68D86 513 aa10.08□□□□□ -0.8
UBR1-205ENST00000564540 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
UBR1-205ENST00000564540 A6NJY4 79 aa10.07□□□□□ -0.8
UBR1-205ENST00000564540 FOXK2Q01167 660 aa10.07□□□□□ -0.8
UBR1-205ENST00000564540 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
UBR1-205ENST00000564540 GPAT2Q6NUI2 795 aa10.07□□□□□ -0.8
UBR1-205ENST00000564540 RASA1P20936 1047 aa10.06□□□□□ -0.8
UBR1-205ENST00000564540 MTFR1Q15390 333 aa10.06□□□□□ -0.8
UBR1-205ENST00000564540 KANK4Q5T7N3 995 aaPredicted RBP10.06□□□□□ -0.8
UBR1-205ENST00000564540 LARGE2Q8N3Y3 721 aa10.06□□□□□ -0.8
UBR1-205ENST00000564540 GPAMQ9HCL2 828 aa10.06□□□□□ -0.8
UBR1-205ENST00000564540 IQSEC3Q9UPP2 1182 aaPredicted RBP10.06□□□□□ -0.8
UBR1-205ENST00000564540 ARID3CA6NKF2 412 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 BACH1O14867 736 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 SLURP2P0DP57 97 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 PLA2G4AP47712 749 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 DBN1Q16643 649 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 SV2AQ7L0J3 742 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 TNS4Q8IZW8 715 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 ZNF295-AS1Q8N0V1 137 aa10.05□□□□□ -0.8
UBR1-205ENST00000564540 ZNF837Q96EG3 531 aaPredicted RBP10.05□□□□□ -0.8
UBR1-205ENST00000564540 COL25A1Q9BXS0 654 aaPredicted RBP10.05□□□□□ -0.8
UBR1-205ENST00000564540 DKK1O94907 266 aa10.04□□□□□ -0.8
UBR1-205ENST00000564540 F11P03951 625 aa10.04□□□□□ -0.8
UBR1-205ENST00000564540 CRTC2Q53ET0 693 aaPredicted RBP10.04□□□□□ -0.8
UBR1-205ENST00000564540 C14orf37Q86TY3 774 aa10.04□□□□□ -0.8
UBR1-205ENST00000564540 TRIM22Q8IYM9 498 aa10.04□□□□□ -0.8
UBR1-205ENST00000564540 SCHIP1Q9P0W5 487 aaPredicted RBP10.04□□□□□ -0.8
UBR1-205ENST00000564540 A0A1B0GTH6 734 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 CDK2AP1O14519 115 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 RFX1P22670 979 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 IRS1P35568 1242 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 EPHA4P54764 986 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 TBCELQ5QJ74 424 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 SIX5Q8N196 739 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 SVOPQ8N4V2 548 aa10.03□□□□□ -0.8
UBR1-205ENST00000564540 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
UBR1-205ENST00000564540 MSX1P28360 303 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms