RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DBN1Q16643 649 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 RNF20Q5VTR2 975 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 CHMP7Q8WUX9 453 aaPredicted RBP5.91□□□□□ -1.46
SLIRP-202ENST00000553981 DYRK1BQ9Y463 629 aa5.91□□□□□ -1.46
SLIRP-202ENST00000553981 SYNJ2O15056 1496 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 GRIN2BQ13224 1484 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 MAGI1Q96QZ7 1491 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-202ENST00000553981 SYNJ1O43426 1573 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 CEP170Q5SW79 1584 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 ABCA5Q8WWZ7 1642 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 MCCD1P59942 119 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-202ENST00000553981 MAP3K10Q02779 954 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 SLC27A3Q5K4L6 730 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 RIPOR1Q6ZS17 1223 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 CYP2U1Q7Z449 544 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 SCARF2Q96GP6 870 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-202ENST00000553981 NLRP3Q96P20 1036 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 GRIP2Q9C0E4 1043 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 MBIPQ9NS73 344 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 PCDHB11Q9Y5F2 797 aa5.9□□□□□ -1.46
SLIRP-202ENST00000553981 DNMT3AQ9Y6K1 912 aaPredicted RBP5.9□□□□□ -1.46
SLIRP-202ENST00000553981 TRAK2O60296 914 aa5.89□□□□□ -1.47
SLIRP-202ENST00000553981 CLN3Q13286 438 aa5.89□□□□□ -1.47
SLIRP-202ENST00000553981 KANK3Q6NY19 840 aa5.89□□□□□ -1.47
SLIRP-202ENST00000553981 GAS2L1Q99501 681 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-202ENST00000553981 OSBPL3Q9H4L5 887 aa5.89□□□□□ -1.47
SLIRP-202ENST00000553981 IGF1RP08069 1367 aa5.89□□□□□ -1.47
SLIRP-202ENST00000553981 SPATA31C2B4DYI2 1134 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 H7C1W4 665 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 NBPF10Q6P3W6 841 aaKnown RBP5.88□□□□□ -1.47
SLIRP-202ENST00000553981 FOXR1Q6PIV2 292 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 NBPF15Q8N660 670 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 MTMR14Q8NCE2 650 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 GTPBP3Q969Y2 492 aaKnown RBP5.88□□□□□ -1.47
SLIRP-202ENST00000553981 ARHGEF10LQ9HCE6 1279 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 ZNF330Q9Y3S2 320 aaPredicted RBP5.88□□□□□ -1.47
SLIRP-202ENST00000553981 ABCA10Q8WWZ4 1543 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 KIF13AQ9H1H9 1805 aa5.88□□□□□ -1.47
SLIRP-202ENST00000553981 SOCS7O14512 581 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 BRPF1P55201 1214 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-202ENST00000553981 GPAT2Q6NUI2 795 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 ENAMQ9NRM1 1142 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 NDUFB9Q9Y6M9 179 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 NUP160Q12769 1436 aa5.87□□□□□ -1.47
SLIRP-202ENST00000553981 SHROOM2Q13796 1616 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 GRIN2AQ12879 1464 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 WASLO00401 505 aaPredicted RBP5.86□□□□□ -1.47
SLIRP-202ENST00000553981 WDR44Q5JSH3 913 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 TAS1R3Q7RTX0 852 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 ACDQ96AP0 544 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 SNRKQ9NRH2 765 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 RAB6BQ9NRW1 208 aa5.86□□□□□ -1.47
SLIRP-202ENST00000553981 ADAMTS12P58397 1594 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 CNTNAP5Q8WYK1 1306 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 GNRH1P01148 92 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 IL2RAP01589 272 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 BCRP11274 1271 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 TRERF1Q96PN7 1200 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 ESF1Q9H501 851 aaKnown RBP5.85□□□□□ -1.47
SLIRP-202ENST00000553981 TIMMDC1Q9NPL8 285 aa5.85□□□□□ -1.47
SLIRP-202ENST00000553981 IGHA1P01876 353 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 F11P03951 625 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 THBS1P07996 1170 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 MX2P20592 715 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 FOXK2Q01167 660 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 CNKSR1Q969H4 720 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 CCDC85AQ96PX6 553 aaPredicted RBP5.84□□□□□ -1.47
SLIRP-202ENST00000553981 ESYT1Q9BSJ8 1104 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
SLIRP-202ENST00000553981 NUCKS1Q9H1E3 243 aaKnown RBP5.84□□□□□ -1.47
SLIRP-202ENST00000553981 CEP126Q9P2H0 1117 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 HRH3Q9Y5N1 445 aa5.84□□□□□ -1.47
SLIRP-202ENST00000553981 CENPCQ03188 943 aa5.83□□□□□ -1.48
SLIRP-202ENST00000553981 NEDD1Q8NHV4 660 aa5.83□□□□□ -1.48
SLIRP-202ENST00000553981 GPAMQ9HCL2 828 aa5.83□□□□□ -1.48
SLIRP-202ENST00000553981 PHF20L1A8MW92 1017 aa5.82□□□□□ -1.48
SLIRP-202ENST00000553981 APBB1O00213 710 aa5.82□□□□□ -1.48
SLIRP-202ENST00000553981 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
SLIRP-202ENST00000553981 PHKA2P46019 1235 aa5.82□□□□□ -1.48
SLIRP-202ENST00000553981 XAGE2Q96GT9 111 aa5.82□□□□□ -1.48
SLIRP-202ENST00000553981 ZSCAN10Q96SZ4 725 aaPredicted RBP5.82□□□□□ -1.48
SLIRP-202ENST00000553981 LRRC4BQ9NT99 713 aa5.82□□□□□ -1.48
SLIRP-202ENST00000553981 NSFL1CQ9UNZ2 370 aaKnown RBP5.82□□□□□ -1.48
SLIRP-202ENST00000553981 PODNQ7Z5L7 613 aa5.81□□□□□ -1.48
SLIRP-202ENST00000553981 BEND7Q8N7W2 519 aaPredicted RBP5.81□□□□□ -1.48
SLIRP-202ENST00000553981 DCAF5Q96JK2 942 aa5.81□□□□□ -1.48
SLIRP-202ENST00000553981 FHDC1Q9C0D6 1143 aaPredicted RBP5.81□□□□□ -1.48
SLIRP-202ENST00000553981 BIVM-ERCC5R4GMW8 1640 aa5.81□□□□□ -1.48
SLIRP-202ENST00000553981 A0A1B0GTH6 734 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 OIP5O43482 229 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 ITGB2P05107 769 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 PLA2G4EQ3MJ16 856 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 TSGA10IPQ3SY00 556 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 CFHR5Q9BXR6 569 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 OXCT2Q9BYC2 517 aaPredicted RBP5.8□□□□□ -1.48
SLIRP-202ENST00000553981 TBC1D2BQ9UPU7 963 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 TOP2BQ02880 1626 aa5.8□□□□□ -1.48
SLIRP-202ENST00000553981 FHAD1B1AJZ9 1412 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms