RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 NCOA3Q9Y6Q9 1424 aa26.34■■□□□ 1.81
PRDM4-205ENST00000550376 AMOTQ4VCS5 1084 aa26.34■■□□□ 1.81
PRDM4-205ENST00000550376 CHMP4BQ9H444 224 aaKnown RBP26.34■■□□□ 1.81
PRDM4-205ENST00000550376 EIF4A1P60842 406 aaKnown RBP26.34■■□□□ 1.81
PRDM4-205ENST00000550376 LRRC37A3O60309 1634 aa26.33■■□□□ 1.81
PRDM4-205ENST00000550376 APBB1O00213 710 aa26.33■■□□□ 1.81
PRDM4-205ENST00000550376 TNS3Q68CZ2 1445 aa26.32■■□□□ 1.8
PRDM4-205ENST00000550376 XIRP1Q702N8 1843 aaKnown RBP26.32■■□□□ 1.8
PRDM4-205ENST00000550376 PHRF1Q9P1Y6 1649 aaKnown RBP26.32■■□□□ 1.8
PRDM4-205ENST00000550376 PRAMEF22A3QJZ6 481 aa26.31■■□□□ 1.8
PRDM4-205ENST00000550376 RAPGEF4Q8WZA2 1011 aa26.31■■□□□ 1.8
PRDM4-205ENST00000550376 CHPF2Q9P2E5 772 aa26.28■■□□□ 1.8
PRDM4-205ENST00000550376 CEP85Q6P2H3 762 aa26.28■■□□□ 1.8
PRDM4-205ENST00000550376 BABAM1Q9NWV8 329 aa26.27■■□□□ 1.8
PRDM4-205ENST00000550376 SLC39A6Q13433 755 aa26.27■■□□□ 1.8
PRDM4-205ENST00000550376 GCC1Q96CN9 775 aa26.27■■□□□ 1.8
PRDM4-205ENST00000550376 NCAPD2Q15021 1401 aa26.25■■□□□ 1.79
PRDM4-205ENST00000550376 C16orf71Q8IYS4 520 aaPredicted RBP26.25■■□□□ 1.79
PRDM4-205ENST00000550376 ANKRD44Q8N8A2 993 aa26.25■■□□□ 1.79
PRDM4-205ENST00000550376 TATP17735 454 aaPredicted RBP26.24■■□□□ 1.79
PRDM4-205ENST00000550376 PRDM11Q9NQV5 511 aa26.24■■□□□ 1.79
PRDM4-205ENST00000550376 CCT4P50991 539 aaKnown RBP26.23■■□□□ 1.79
PRDM4-205ENST00000550376 ATP10DQ9P241 1426 aa26.23■■□□□ 1.79
PRDM4-205ENST00000550376 SMARCA5O60264 1052 aaPredicted RBP26.23■■□□□ 1.79
PRDM4-205ENST00000550376 NFATC2IPQ8NCF5 419 aa26.22■■□□□ 1.79
PRDM4-205ENST00000550376 MEGF6O75095 1541 aa26.22■■□□□ 1.79
PRDM4-205ENST00000550376 DCTPP1Q9H773 170 aa26.22■■□□□ 1.79
PRDM4-205ENST00000550376 PROSER3Q2NL68 480 aa26.21■■□□□ 1.79
PRDM4-205ENST00000550376 NBR1Q14596 966 aa26.2■■□□□ 1.79
PRDM4-205ENST00000550376 OTUD7AQ8TE49 926 aaPredicted RBP26.2■■□□□ 1.78
PRDM4-205ENST00000550376 PHKG2P15735 406 aa26.19■■□□□ 1.78
PRDM4-205ENST00000550376 MFAP1P55081 439 aaKnown RBP26.19■■□□□ 1.78
PRDM4-205ENST00000550376 RPAP2Q8IXW5 612 aaPredicted RBP26.19■■□□□ 1.78
PRDM4-205ENST00000550376 SOS2Q07890 1332 aaPredicted RBP26.19■■□□□ 1.78
PRDM4-205ENST00000550376 CYP27B1O15528 508 aa26.19■■□□□ 1.78
PRDM4-205ENST00000550376 GIGYF1O75420 1035 aaPredicted RBP26.18■■□□□ 1.78
PRDM4-205ENST00000550376 LMO7Q8WWI1 1683 aa26.18■■□□□ 1.78
PRDM4-205ENST00000550376 PI4KAP2A4QPH2 592 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 PI4KAP1Q8N8J0 262 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 STRN4Q9NRL3 753 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 DDRGK1Q96HY6 314 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 SPG7Q9UQ90 795 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 COL18A1P39060 1754 aa26.17■■□□□ 1.78
PRDM4-205ENST00000550376 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
PRDM4-205ENST00000550376 FAM208AQ9UK61 1670 aaKnown RBP26.16■■□□□ 1.78
PRDM4-205ENST00000550376 GNAI2P04899 355 aa26.15■■□□□ 1.78
PRDM4-205ENST00000550376 USP44Q9H0E7 712 aa26.15■■□□□ 1.78
PRDM4-205ENST00000550376 PNMA6EA0A0J9YXQ4 647 aa26.14■■□□□ 1.78
PRDM4-205ENST00000550376 USP35Q9P2H5 1018 aa26.14■■□□□ 1.78
PRDM4-205ENST00000550376 LRRFIP2Q9Y608 721 aaKnown RBP26.14■■□□□ 1.78
PRDM4-205ENST00000550376 KDM6AO15550 1401 aaPredicted RBP26.14■■□□□ 1.78
PRDM4-205ENST00000550376 EXOC6BQ9Y2D4 811 aa26.14■■□□□ 1.77
PRDM4-205ENST00000550376 SOS1Q07889 1333 aaPredicted RBP26.13■■□□□ 1.77
PRDM4-205ENST00000550376 IFNL2Q8IZJ0 200 aa26.13■■□□□ 1.77
PRDM4-205ENST00000550376 SLC52A2Q9HAB3 445 aa26.13■■□□□ 1.77
PRDM4-205ENST00000550376 CAMTA1Q9Y6Y1 1673 aa26.13■■□□□ 1.77
PRDM4-205ENST00000550376 PIP4K2AP48426 406 aaPredicted RBP26.12■■□□□ 1.77
PRDM4-205ENST00000550376 ZNF790Q6PG37 636 aa26.12■■□□□ 1.77
PRDM4-205ENST00000550376 CPDO75976 1380 aa26.12■■□□□ 1.77
PRDM4-205ENST00000550376 AIMP1Q12904 312 aaKnown RBP26.12■■□□□ 1.77
PRDM4-205ENST00000550376 PLEKHM2Q8IWE5 1019 aa26.12■■□□□ 1.77
PRDM4-205ENST00000550376 UPF2Q9HAU5 1272 aaKnown RBP26.11■■□□□ 1.77
PRDM4-205ENST00000550376 DAXXQ9UER7 740 aaPredicted RBP26.11■■□□□ 1.77
PRDM4-205ENST00000550376 KDM3BQ7LBC6 1761 aa26.11■■□□□ 1.77
PRDM4-205ENST00000550376 VIRMAQ69YN4 1812 aaKnown RBP26.1■■□□□ 1.77
PRDM4-205ENST00000550376 HOXB7P09629 217 aa26.1■■□□□ 1.77
PRDM4-205ENST00000550376 TBC1D32Q96NH3 1257 aa26.1■■□□□ 1.77
PRDM4-205ENST00000550376 DBF4Q9UBU7 674 aaPredicted RBP26.1■■□□□ 1.77
PRDM4-205ENST00000550376 NBPF7P0C2Y1 421 aaPredicted RBP26.09■■□□□ 1.77
PRDM4-205ENST00000550376 LARP1Q6PKG0 1096 aaKnown RBP26.09■■□□□ 1.77
PRDM4-205ENST00000550376 SRCIN1Q9C0H9 1055 aa26.09■■□□□ 1.77
PRDM4-205ENST00000550376 GNAI3P08754 354 aa26.09■■□□□ 1.77
PRDM4-205ENST00000550376 DNAAF4Q8WXU2 420 aa26.09■■□□□ 1.77
PRDM4-205ENST00000550376 ZNF496Q96IT1 587 aaPredicted RBP26.09■■□□□ 1.77
PRDM4-205ENST00000550376 GSPT1P15170 499 aaKnown RBP26.08■■□□□ 1.77
PRDM4-205ENST00000550376 BMP2KLQ5H9B9 411 aa26.08■■□□□ 1.77
PRDM4-205ENST00000550376 UBTFL1P0CB47 393 aaPredicted RBP26.08■■□□□ 1.77
PRDM4-205ENST00000550376 MYL6BP14649 208 aa26.08■■□□□ 1.77
PRDM4-205ENST00000550376 WDR17Q8IZU2 1322 aa26.07■■□□□ 1.76
PRDM4-205ENST00000550376 CRYBG1Q9Y4K1 1723 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 EVA1CP58658 441 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 BEND3Q5T5X7 828 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 DDX54Q8TDD1 881 aaKnown RBP26.06■■□□□ 1.76
PRDM4-205ENST00000550376 MAP3K2Q9Y2U5 619 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 ADCY9O60503 1353 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 HEG1Q9ULI3 1381 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 HMMRO75330 724 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 TSHZ3Q63HK5 1081 aa26.06■■□□□ 1.76
PRDM4-205ENST00000550376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.06■■□□□ 1.76
PRDM4-205ENST00000550376 DCAF5Q96JK2 942 aa26.05■■□□□ 1.76
PRDM4-205ENST00000550376 C22orf23Q9BZE7 217 aa26.05■■□□□ 1.76
PRDM4-205ENST00000550376 CWF19L2Q2TBE0 894 aaKnown RBP26.04■■□□□ 1.76
PRDM4-205ENST00000550376 USP16Q9Y5T5 823 aa26.04■■□□□ 1.76
PRDM4-205ENST00000550376 CABP4P57796 275 aa26.04■■□□□ 1.76
PRDM4-205ENST00000550376 ATP8B2P98198 1209 aa26.04■■□□□ 1.76
PRDM4-205ENST00000550376 PDIA6Q15084 440 aa26.03■■□□□ 1.76
PRDM4-205ENST00000550376 TBC1D9Q6ZT07 1266 aa26.02■■□□□ 1.76
PRDM4-205ENST00000550376 ZCRB1Q8TBF4 217 aaKnown RBP26.02■■□□□ 1.76
PRDM4-205ENST00000550376 OVOS2A0A0G2JMS6 1433 aa26.02■■□□□ 1.76
PRDM4-205ENST00000550376 PPP1R42Q7Z4L9 355 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms