RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
RNF41-203ENST00000547967 LRRC37A3O60309 1634 aa14.8□□□□□ -0.04
RNF41-203ENST00000547967 EIF4A1P60842 406 aaKnown RBP14.8□□□□□ -0.04
RNF41-203ENST00000547967 NUCB1Q02818 461 aa14.8□□□□□ -0.04
RNF41-203ENST00000547967 CHD1LQ86WJ1 897 aa14.79□□□□□ -0.04
RNF41-203ENST00000547967 PHAXQ9H814 394 aaKnown RBP14.79□□□□□ -0.04
RNF41-203ENST00000547967 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
RNF41-203ENST00000547967 ANXA1P04083 346 aa14.77□□□□□ -0.04
RNF41-203ENST00000547967 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.04
RNF41-203ENST00000547967 GCC1Q96CN9 775 aa14.77□□□□□ -0.04
RNF41-203ENST00000547967 PRDM11Q9NQV5 511 aa14.77□□□□□ -0.04
RNF41-203ENST00000547967 NCAPD2Q15021 1401 aa14.77□□□□□ -0.05
RNF41-203ENST00000547967 APBB1O00213 710 aa14.76□□□□□ -0.05
RNF41-203ENST00000547967 CCT4P50991 539 aaKnown RBP14.76□□□□□ -0.05
RNF41-203ENST00000547967 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
RNF41-203ENST00000547967 PRAMEF22A3QJZ6 481 aa14.75□□□□□ -0.05
RNF41-203ENST00000547967 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
RNF41-203ENST00000547967 SOS2Q07890 1332 aaPredicted RBP14.74□□□□□ -0.05
RNF41-203ENST00000547967 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
RNF41-203ENST00000547967 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
RNF41-203ENST00000547967 ANKRD44Q8N8A2 993 aa14.74□□□□□ -0.05
RNF41-203ENST00000547967 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
RNF41-203ENST00000547967 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
RNF41-203ENST00000547967 NFATC2IPQ8NCF5 419 aa14.73□□□□□ -0.05
RNF41-203ENST00000547967 MEGF6O75095 1541 aa14.73□□□□□ -0.05
RNF41-203ENST00000547967 PHKG2P15735 406 aa14.73□□□□□ -0.05
RNF41-203ENST00000547967 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
RNF41-203ENST00000547967 RPAP2Q8IXW5 612 aaPredicted RBP14.73□□□□□ -0.05
RNF41-203ENST00000547967 LMO7Q8WWI1 1683 aa14.73□□□□□ -0.05
RNF41-203ENST00000547967 DCTPP1Q9H773 170 aa14.72□□□□□ -0.05
RNF41-203ENST00000547967 ATP10DQ9P241 1426 aa14.72□□□□□ -0.05
RNF41-203ENST00000547967 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
RNF41-203ENST00000547967 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
RNF41-203ENST00000547967 STRN4Q9NRL3 753 aa14.71□□□□□ -0.05
RNF41-203ENST00000547967 CPDO75976 1380 aa14.71□□□□□ -0.05
RNF41-203ENST00000547967 COL18A1P39060 1754 aa14.71□□□□□ -0.05
RNF41-203ENST00000547967 CYP27B1O15528 508 aa14.71□□□□□ -0.06
RNF41-203ENST00000547967 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.06
RNF41-203ENST00000547967 GNAI2P04899 355 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 C16orf71Q8IYS4 520 aaPredicted RBP14.7□□□□□ -0.06
RNF41-203ENST00000547967 FAM208AQ9UK61 1670 aaKnown RBP14.7□□□□□ -0.06
RNF41-203ENST00000547967 CAMTA1Q9Y6Y1 1673 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 PI4KAP2A4QPH2 592 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 SMARCA5O60264 1052 aaPredicted RBP14.7□□□□□ -0.06
RNF41-203ENST00000547967 HOXB7P09629 217 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 PI4KAP1Q8N8J0 262 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 SLC52A2Q9HAB3 445 aa14.7□□□□□ -0.06
RNF41-203ENST00000547967 UPF2Q9HAU5 1272 aaKnown RBP14.69□□□□□ -0.06
RNF41-203ENST00000547967 USP35Q9P2H5 1018 aa14.69□□□□□ -0.06
RNF41-203ENST00000547967 MFAP1P55081 439 aaKnown RBP14.69□□□□□ -0.06
RNF41-203ENST00000547967 ZNF790Q6PG37 636 aa14.69□□□□□ -0.06
RNF41-203ENST00000547967 KDM6AO15550 1401 aaPredicted RBP14.68□□□□□ -0.06
RNF41-203ENST00000547967 USP44Q9H0E7 712 aa14.68□□□□□ -0.06
RNF41-203ENST00000547967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
RNF41-203ENST00000547967 DBF4Q9UBU7 674 aaPredicted RBP14.68□□□□□ -0.06
RNF41-203ENST00000547967 DAXXQ9UER7 740 aaPredicted RBP14.68□□□□□ -0.06
RNF41-203ENST00000547967 KDM3BQ7LBC6 1761 aa14.68□□□□□ -0.06
RNF41-203ENST00000547967 GNAI3P08754 354 aa14.68□□□□□ -0.06
RNF41-203ENST00000547967 EVA1CP58658 441 aa14.68□□□□□ -0.06
RNF41-203ENST00000547967 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
RNF41-203ENST00000547967 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
RNF41-203ENST00000547967 VIRMAQ69YN4 1812 aaKnown RBP14.67□□□□□ -0.06
RNF41-203ENST00000547967 HMMRO75330 724 aa14.67□□□□□ -0.06
RNF41-203ENST00000547967 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
RNF41-203ENST00000547967 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
RNF41-203ENST00000547967 DCAF5Q96JK2 942 aa14.67□□□□□ -0.06
RNF41-203ENST00000547967 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
RNF41-203ENST00000547967 SRCIN1Q9C0H9 1055 aa14.67□□□□□ -0.06
RNF41-203ENST00000547967 CACNA1FO60840 1977 aa14.67□□□□□ -0.06
RNF41-203ENST00000547967 PNMA6EA0A0J9YXQ4 647 aa14.66□□□□□ -0.06
RNF41-203ENST00000547967 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
RNF41-203ENST00000547967 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
RNF41-203ENST00000547967 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
RNF41-203ENST00000547967 CRYBG1Q9Y4K1 1723 aa14.66□□□□□ -0.06
RNF41-203ENST00000547967 OVOS2A0A0G2JMS6 1433 aa14.66□□□□□ -0.06
RNF41-203ENST00000547967 UBTFL1P0CB47 393 aaPredicted RBP14.66□□□□□ -0.06
RNF41-203ENST00000547967 NBR1Q14596 966 aa14.65□□□□□ -0.06
RNF41-203ENST00000547967 PLEKHM2Q8IWE5 1019 aa14.65□□□□□ -0.06
RNF41-203ENST00000547967 DDX54Q8TDD1 881 aaKnown RBP14.65□□□□□ -0.06
RNF41-203ENST00000547967 ZNF496Q96IT1 587 aaPredicted RBP14.65□□□□□ -0.06
RNF41-203ENST00000547967 MYL6BP14649 208 aa14.65□□□□□ -0.06
RNF41-203ENST00000547967 CABP4P57796 275 aa14.65□□□□□ -0.06
RNF41-203ENST00000547967 BMP2KLQ5H9B9 411 aa14.65□□□□□ -0.06
RNF41-203ENST00000547967 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
RNF41-203ENST00000547967 NBPF7P0C2Y1 421 aaPredicted RBP14.64□□□□□ -0.07
RNF41-203ENST00000547967 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
RNF41-203ENST00000547967 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
RNF41-203ENST00000547967 ZCRB1Q8TBF4 217 aaKnown RBP14.64□□□□□ -0.07
RNF41-203ENST00000547967 MAP3K2Q9Y2U5 619 aa14.64□□□□□ -0.07
RNF41-203ENST00000547967 BEND3Q5T5X7 828 aa14.64□□□□□ -0.07
RNF41-203ENST00000547967 TBC1D32Q96NH3 1257 aa14.64□□□□□ -0.07
RNF41-203ENST00000547967 ADCY9O60503 1353 aa14.63□□□□□ -0.07
RNF41-203ENST00000547967 COL5A2P05997 1499 aaPredicted RBP14.63□□□□□ -0.07
RNF41-203ENST00000547967 ATP8B2P98198 1209 aa14.63□□□□□ -0.07
RNF41-203ENST00000547967 USP16Q9Y5T5 823 aa14.62□□□□□ -0.07
RNF41-203ENST00000547967 HSP90AB1P08238 724 aaKnown RBP14.62□□□□□ -0.07
RNF41-203ENST00000547967 IL2RBP14784 551 aa14.62□□□□□ -0.07
RNF41-203ENST00000547967 GSPT1P15170 499 aaKnown RBP14.62□□□□□ -0.07
RNF41-203ENST00000547967 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms