RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 ERBB3P21860 1342 aa12.62□□□□□ -0.39
RAB6A-209ENST00000541973 FAM208AQ9UK61 1670 aaKnown RBP12.61□□□□□ -0.39
RAB6A-209ENST00000541973 DIEXFQ68CQ4 756 aaKnown RBP12.61□□□□□ -0.39
RAB6A-209ENST00000541973 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
RAB6A-209ENST00000541973 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
RAB6A-209ENST00000541973 NRAPQ86VF7 1730 aa12.61□□□□□ -0.39
RAB6A-209ENST00000541973 PEAK1Q9H792 1746 aa12.61□□□□□ -0.39
RAB6A-209ENST00000541973 TOM1L2Q6ZVM7 507 aa12.6□□□□□ -0.39
RAB6A-209ENST00000541973 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
RAB6A-209ENST00000541973 THRAP3Q9Y2W1 955 aaKnown RBP12.6□□□□□ -0.39
RAB6A-209ENST00000541973 CRB1P82279 1406 aa12.6□□□□□ -0.39
RAB6A-209ENST00000541973 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
RAB6A-209ENST00000541973 LTV1Q96GA3 475 aaPredicted RBP12.59□□□□□ -0.39
RAB6A-209ENST00000541973 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
RAB6A-209ENST00000541973 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
RAB6A-209ENST00000541973 ATRNO75882 1429 aa12.59□□□□□ -0.39
RAB6A-209ENST00000541973 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
RAB6A-209ENST00000541973 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
RAB6A-209ENST00000541973 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
RAB6A-209ENST00000541973 GJD4Q96KN9 370 aaPredicted RBP12.58□□□□□ -0.4
RAB6A-209ENST00000541973 CDCA7Q9BWT1 371 aaPredicted RBP12.58□□□□□ -0.4
RAB6A-209ENST00000541973 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
RAB6A-209ENST00000541973 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
RAB6A-209ENST00000541973 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
RAB6A-209ENST00000541973 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
RAB6A-209ENST00000541973 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
RAB6A-209ENST00000541973 SPATA31A1Q5TZJ5 1347 aa12.57□□□□□ -0.4
RAB6A-209ENST00000541973 G3V3G9 751 aa12.56□□□□□ -0.4
RAB6A-209ENST00000541973 RXRBP28702 533 aa12.56□□□□□ -0.4
RAB6A-209ENST00000541973 IL13P35225 146 aa12.56□□□□□ -0.4
RAB6A-209ENST00000541973 BARGINQ6ZT62 677 aa12.56□□□□□ -0.4
RAB6A-209ENST00000541973 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
RAB6A-209ENST00000541973 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
RAB6A-209ENST00000541973 NBPF6Q5VWK0 638 aa12.54□□□□□ -0.4
RAB6A-209ENST00000541973 NBPF4Q96M43 638 aa12.54□□□□□ -0.4
RAB6A-209ENST00000541973 EYA1Q99502 592 aa12.54□□□□□ -0.4
RAB6A-209ENST00000541973 PNNQ9H307 717 aaKnown RBP12.54□□□□□ -0.4
RAB6A-209ENST00000541973 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
RAB6A-209ENST00000541973 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
RAB6A-209ENST00000541973 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
RAB6A-209ENST00000541973 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
RAB6A-209ENST00000541973 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
RAB6A-209ENST00000541973 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
RAB6A-209ENST00000541973 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
RAB6A-209ENST00000541973 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
RAB6A-209ENST00000541973 IL2RBP14784 551 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 GLI3P10071 1580 aa12.52□□□□□ -0.41
RAB6A-209ENST00000541973 FCHSD2O94868 740 aa12.51□□□□□ -0.41
RAB6A-209ENST00000541973 TATP17735 454 aaPredicted RBP12.51□□□□□ -0.41
RAB6A-209ENST00000541973 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
RAB6A-209ENST00000541973 FAM98CQ17RN3 349 aaKnown RBP12.51□□□□□ -0.41
RAB6A-209ENST00000541973 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
RAB6A-209ENST00000541973 PPP1R37O75864 691 aa12.5□□□□□ -0.41
RAB6A-209ENST00000541973 NEFMP07197 916 aa12.5□□□□□ -0.41
RAB6A-209ENST00000541973 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
RAB6A-209ENST00000541973 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.414e-9■■□□□ 12.7
RAB6A-209ENST00000541973 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
RAB6A-209ENST00000541973 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
RAB6A-209ENST00000541973 KDRP35968 1356 aa12.5□□□□□ -0.41
RAB6A-209ENST00000541973 A0A0G2JS52 829 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 EXOC5O00471 708 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 EMP3P54852 163 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 MYT1Q01538 1121 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
RAB6A-209ENST00000541973 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
RAB6A-209ENST00000541973 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 DDB1Q16531 1140 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
RAB6A-209ENST00000541973 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
RAB6A-209ENST00000541973 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
RAB6A-209ENST00000541973 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
RAB6A-209ENST00000541973 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
RAB6A-209ENST00000541973 ZCRB1Q8TBF4 217 aaKnown RBP12.47□□□□□ -0.41
RAB6A-209ENST00000541973 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
RAB6A-209ENST00000541973 HMOX1P09601 288 aa12.46□□□□□ -0.41
RAB6A-209ENST00000541973 TMEM92Q6UXU6 159 aa12.46□□□□□ -0.41
RAB6A-209ENST00000541973 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
RAB6A-209ENST00000541973 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
RAB6A-209ENST00000541973 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
RAB6A-209ENST00000541973 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
RAB6A-209ENST00000541973 WDR70Q9NW82 654 aa12.45□□□□□ -0.42
RAB6A-209ENST00000541973 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 MEGF6O75095 1541 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 KRT27Q7Z3Y8 459 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
RAB6A-209ENST00000541973 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
RAB6A-209ENST00000541973 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
RAB6A-209ENST00000541973 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
RAB6A-209ENST00000541973 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms