RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 WASLO00401 505 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-217ENST00000541578 TLR1Q15399 786 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 SV2AQ7L0J3 742 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 TRIM50Q86XT4 487 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 PLEKHM2Q8IWE5 1019 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 TIMMDC1Q9NPL8 285 aa7.93□□□□□ -1.14
SNHG1-217ENST00000541578 CDC14CA4D256 554 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 USP17L4A6NCW7 530 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 INSM1Q01101 510 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-217ENST00000541578 PSME1Q06323 249 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 USP17L2Q6R6M4 530 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 USP17L1Q7RTZ2 530 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 GAS2L1Q99501 681 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-217ENST00000541578 TFIP11Q9UBB9 837 aaKnown RBP7.92□□□□□ -1.14
SNHG1-217ENST00000541578 SERTAD1Q9UHV2 236 aa7.92□□□□□ -1.14
SNHG1-217ENST00000541578 TMEM229AB2RXF0 380 aa7.91□□□□□ -1.14
SNHG1-217ENST00000541578 PHKA2P46019 1235 aa7.91□□□□□ -1.14
SNHG1-217ENST00000541578 SMTNP53814 917 aa7.91□□□□□ -1.14
SNHG1-217ENST00000541578 RIPOR1Q6ZS17 1223 aa7.91□□□□□ -1.14
SNHG1-217ENST00000541578 PPARGC1BQ86YN6 1023 aaKnown RBP7.91□□□□□ -1.14
SNHG1-217ENST00000541578 GPR161Q8N6U8 529 aaKnown RBP7.91□□□□□ -1.14
SNHG1-217ENST00000541578 ZNF777Q9ULD5 760 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-217ENST00000541578 TRIM22Q8IYM9 498 aa7.9□□□□□ -1.14
SNHG1-217ENST00000541578 GMCL1Q96IK5 515 aa7.9□□□□□ -1.14
SNHG1-217ENST00000541578 SLC4A9Q96Q91 983 aa7.9□□□□□ -1.14
SNHG1-217ENST00000541578 CUEDC1Q9NWM3 386 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-217ENST00000541578 MKRN1Q9UHC7 482 aaKnown RBP7.9□□□□□ -1.14
SNHG1-217ENST00000541578 BACH1O14867 736 aa7.89□□□□□ -1.15
SNHG1-217ENST00000541578 F11P03951 625 aa7.89□□□□□ -1.15
SNHG1-217ENST00000541578 ATP1A2P50993 1020 aa7.89□□□□□ -1.15
SNHG1-217ENST00000541578 C4orf17Q53FE4 359 aa7.89□□□□□ -1.15
SNHG1-217ENST00000541578 RHBDD1Q8TEB9 315 aa7.89□□□□□ -1.15
SNHG1-217ENST00000541578 PALM3A6NDB9 673 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-217ENST00000541578 H7C1W4 665 aa7.88□□□□□ -1.15
SNHG1-217ENST00000541578 CDK2AP1O14519 115 aa7.88□□□□□ -1.15
SNHG1-217ENST00000541578 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-217ENST00000541578 PPP1R12CQ9BZL4 782 aa7.88□□□□□ -1.15
SNHG1-217ENST00000541578 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
SNHG1-217ENST00000541578 DNAAF2Q9NVR5 837 aaKnown RBP7.88□□□□□ -1.15
SNHG1-217ENST00000541578 MAFBQ9Y5Q3 323 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-217ENST00000541578 A0A1B0GTH6 734 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 A6NJY4 79 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 ZBTB7BO15156 539 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-217ENST00000541578 DBN1Q16643 649 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 CCDC102BQ68D86 513 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 FOXR1Q6PIV2 292 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 OGFOD1Q8N543 542 aa7.87□□□□□ -1.15
SNHG1-217ENST00000541578 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.87□□□□□ -1.152e-85■□□□□ 9.7
SNHG1-217ENST00000541578 NIFKQ9BYG3 293 aaKnown RBP7.87□□□□□ -1.15
SNHG1-217ENST00000541578 CLDN10P78369 228 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 MTFR1Q15390 333 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 LARGE2Q8N3Y3 721 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 TPCN2Q8NHX9 752 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-217ENST00000541578 GPAMQ9HCL2 828 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 ZNF358Q9NW07 568 aa7.86□□□□□ -1.15
SNHG1-217ENST00000541578 MSX1P28360 303 aa7.85□□□□□ -1.15
SNHG1-217ENST00000541578 ZSCAN1Q8NBB4 408 aa7.85□□□□□ -1.15
SNHG1-217ENST00000541578 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
SNHG1-217ENST00000541578 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
SNHG1-217ENST00000541578 RBM19Q9Y4C8 960 aaKnown RBP7.85□□□□□ -1.15
SNHG1-217ENST00000541578 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 RASA1P20936 1047 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 LMOD1P29536 600 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-217ENST00000541578 PLA2G4AP47712 749 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 KRT76Q01546 638 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 PGBD3Q8N328 593 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 GTPBP3Q969Y2 492 aaKnown RBP7.84□□□□□ -1.15
SNHG1-217ENST00000541578 NUCKS1Q9H1E3 243 aaKnown RBP7.84□□□□□ -1.15
SNHG1-217ENST00000541578 SCHIP1Q9P0W5 487 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-217ENST00000541578 STK17AQ9UEE5 414 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 IQSEC3Q9UPP2 1182 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-217ENST00000541578 KIAA1024Q9UPX6 916 aa7.84□□□□□ -1.15
SNHG1-217ENST00000541578 RNFT1Q5M7Z0 435 aa7.83□□□□□ -1.16
SNHG1-217ENST00000541578 LARP1Q6PKG0 1096 aaKnown RBP7.83□□□□□ -1.16
SNHG1-217ENST00000541578 AIDAQ96BJ3 306 aa7.83□□□□□ -1.16
SNHG1-217ENST00000541578 ZNF594Q96JF6 807 aaPredicted RBP7.83□□□□□ -1.16
SNHG1-217ENST00000541578 CABP1Q9NZU7 370 aa7.83□□□□□ -1.16
SNHG1-217ENST00000541578 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
SNHG1-217ENST00000541578 SIX5Q8N196 739 aa7.82□□□□□ -1.16
SNHG1-217ENST00000541578 TRERF1Q96PN7 1200 aa7.82□□□□□ -1.16
SNHG1-217ENST00000541578 VRTNQ9H8Y1 702 aa7.82□□□□□ -1.16
SNHG1-217ENST00000541578 FAM181BA6NEQ2 426 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 GPR25O00155 361 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 SUPT5HO00267 1087 aaKnown RBP7.81□□□□□ -1.16
SNHG1-217ENST00000541578 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-217ENST00000541578 NBPF1Q3BBV0 1214 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 KANK4Q5T7N3 995 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-217ENST00000541578 ZNF295-AS1Q8N0V1 137 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 C1orf216Q8TAB5 229 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 RUBCNLQ9H714 662 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 USP3Q9Y6I4 520 aa7.81□□□□□ -1.16
SNHG1-217ENST00000541578 M0R2N6 131 aa7.8□□□□□ -1.16
SNHG1-217ENST00000541578 EPHA4P54764 986 aa7.8□□□□□ -1.16
SNHG1-217ENST00000541578 FOXK2Q01167 660 aa7.8□□□□□ -1.16
SNHG1-217ENST00000541578 GAS6Q14393 721 aa7.8□□□□□ -1.16
SNHG1-217ENST00000541578 LBRQ14739 615 aaKnown RBP7.8□□□□□ -1.16
SNHG1-217ENST00000541578 EFHC2Q5JST6 749 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms