RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GSK3AP49840 483 aa6.42□□□□□ -1.38
CSDE1-208ENST00000524652 LBRQ14739 615 aaKnown RBP6.42□□□□□ -1.38
CSDE1-208ENST00000524652 TMEM214Q6NUQ4 689 aaKnown RBP6.42□□□□□ -1.38
CSDE1-208ENST00000524652 PLPP7Q8NBV4 271 aa6.42□□□□□ -1.38
CSDE1-208ENST00000524652 RHBDD1Q8TEB9 315 aa6.42□□□□□ -1.38
CSDE1-208ENST00000524652 GTPBP3Q969Y2 492 aaKnown RBP6.42□□□□□ -1.38
CSDE1-208ENST00000524652 NUCKS1Q9H1E3 243 aaKnown RBP6.42□□□□□ -1.38
CSDE1-208ENST00000524652 MAP3K10Q02779 954 aa6.41□□□□□ -1.38
CSDE1-208ENST00000524652 TLR1Q15399 786 aa6.41□□□□□ -1.38
CSDE1-208ENST00000524652 PPARGC1BQ86YN6 1023 aaKnown RBP6.41□□□□□ -1.38
CSDE1-208ENST00000524652 IGF1RP08069 1367 aa6.41□□□□□ -1.38
CSDE1-208ENST00000524652 INHAP05111 366 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 CELA2BP08218 269 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-208ENST00000524652 PHKA2P46019 1235 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 SCNN1DP51172 638 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 C4orf17Q53FE4 359 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 LYPD4Q6UWN0 246 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 WWC1Q8IX03 1113 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 ENAMQ9NRM1 1142 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 LRRC4BQ9NT99 713 aa6.4□□□□□ -1.38
CSDE1-208ENST00000524652 NSFL1CQ9UNZ2 370 aaKnown RBP6.4□□□□□ -1.38
CSDE1-208ENST00000524652 MX2P20592 715 aa6.39□□□□□ -1.39
CSDE1-208ENST00000524652 GDF10P55107 478 aa6.39□□□□□ -1.39
CSDE1-208ENST00000524652 CFHR5Q9BXR6 569 aa6.39□□□□□ -1.39
CSDE1-208ENST00000524652 GPAMQ9HCL2 828 aa6.39□□□□□ -1.39
CSDE1-208ENST00000524652 LZTS3O60299 673 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-208ENST00000524652 STAU1O95793 577 aaKnown RBP6.38□□□□□ -1.39
CSDE1-208ENST00000524652 THBS1P07996 1170 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 CSB-PGBD3P0DP91 1061 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 RASSF7Q02833 373 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 FLIIQ13045 1269 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 PGBD3Q8N328 593 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 NFATC2IPQ8NCF5 419 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 SCARF2Q96GP6 870 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-208ENST00000524652 PHF24Q9UPV7 400 aa6.38□□□□□ -1.39
CSDE1-208ENST00000524652 RAD21O60216 631 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 BCRP11274 1271 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 MAP2K3P46734 347 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 MARSP56192 900 aaKnown RBP6.37□□□□□ -1.39
CSDE1-208ENST00000524652 UBAP2LQ14157 1087 aaKnown RBP6.37□□□□□ -1.39
CSDE1-208ENST00000524652 EFHC2Q5JST6 749 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 TMEM151AQ8N4L1 468 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 C1orf216Q8TAB5 229 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 ALG2Q9H553 416 aa6.37□□□□□ -1.39
CSDE1-208ENST00000524652 PIK3CDO00329 1044 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 GDF11O95390 407 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 MSX1P28360 303 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 SMTNP53814 917 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 EML3Q32P44 896 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 KANK3Q6NY19 840 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 TBC1D9Q6ZT07 1266 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 ACDQ96AP0 544 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 POM121Q96HA1 1249 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 SLC4A9Q96Q91 983 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
CSDE1-208ENST00000524652 ATXN7L1Q9ULK2 861 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-208ENST00000524652 TMEM229AB2RXF0 380 aa6.35□□□□□ -1.39
CSDE1-208ENST00000524652 UBTFP17480 764 aaKnown RBP6.35□□□□□ -1.39
CSDE1-208ENST00000524652 PLA2G4AP47712 749 aa6.35□□□□□ -1.39
CSDE1-208ENST00000524652 MTFR1Q15390 333 aa6.35□□□□□ -1.39
CSDE1-208ENST00000524652 NIFKQ9BYG3 293 aaKnown RBP6.35□□□□□ -1.39
CSDE1-208ENST00000524652 NOD1Q9Y239 953 aa6.35□□□□□ -1.39
CSDE1-208ENST00000524652 PCDHGA11Q9Y5H2 935 aa6.35□□□□□ -1.39
CSDE1-208ENST00000524652 SKIP12755 728 aa6.34□□□□□ -1.39
CSDE1-208ENST00000524652 ATP4AP20648 1035 aa6.34□□□□□ -1.39
CSDE1-208ENST00000524652 IRS1P35568 1242 aa6.34□□□□□ -1.39
CSDE1-208ENST00000524652 FIGNL1Q6PIW4 674 aa6.34□□□□□ -1.39
CSDE1-208ENST00000524652 OXCT2Q9BYC2 517 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-208ENST00000524652 A6NJY4 79 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 CDK2AP1O14519 115 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 OIP5O43482 229 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 NCOA4Q13772 614 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 ZNF295-AS1Q8N0V1 137 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 NDFIP2Q9NV92 336 aa6.33□□□□□ -1.4
CSDE1-208ENST00000524652 GDF2Q9UK05 429 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-208ENST00000524652 IQSEC3Q9UPP2 1182 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-208ENST00000524652 DNMT3AQ9Y6K1 912 aaPredicted RBP6.33□□□□□ -1.4
CSDE1-208ENST00000524652 USP17L5A8MUK1 530 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 PHF20L1A8MW92 1017 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 BACH1O14867 736 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 GTF2IP78347 998 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 NBPF1Q3BBV0 1214 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 NLRP8Q86W28 1048 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 KCTD17Q8N5Z5 321 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 NEDD1Q8NHV4 660 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 DNAAF2Q9NVR5 837 aaKnown RBP6.32□□□□□ -1.4
CSDE1-208ENST00000524652 ZDHHC3Q9NYG2 299 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 SERTAD1Q9UHV2 236 aa6.32□□□□□ -1.4
CSDE1-208ENST00000524652 BNIP3LO60238 219 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 FGFR3P22607 806 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 FOXK2Q01167 660 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 PODNQ7Z5L7 613 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 BEND7Q8N7W2 519 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-208ENST00000524652 GOLGA6L1Q8N7Z2 621 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 KLRG1Q96E93 195 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
CSDE1-208ENST00000524652 TATP17735 454 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-208ENST00000524652 PSME1Q06323 249 aa6.3□□□□□ -1.4
CSDE1-208ENST00000524652 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms