RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 NSFL1CQ9UNZ2 370 aaKnown RBP5.93□□□□□ -1.46
SCARNA16.2-201ENST00000516520 TLR1Q15399 786 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 RHBDD1Q8TEB9 315 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 WHAMMQ8TF30 809 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 ETNK1Q9HBU6 452 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 ENAMQ9NRM1 1142 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 PHF24Q9UPV7 400 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 COG6Q9Y2V7 657 aa5.92□□□□□ -1.46
SCARNA16.2-201ENST00000516520 GPR25O00155 361 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 RAD21O60216 631 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 ARHGEF15O94989 841 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 CSB-PGBD3P0DP91 1061 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 MARSP56192 900 aaKnown RBP5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 FLIIQ13045 1269 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 TSGA10IPQ3SY00 556 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 C4orf17Q53FE4 359 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 LYPD4Q6UWN0 246 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 PPARGC1BQ86YN6 1023 aaKnown RBP5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 PGBD3Q8N328 593 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 IGF1RP08069 1367 aa5.91□□□□□ -1.46
SCARNA16.2-201ENST00000516520 LZTS3O60299 673 aaPredicted RBP5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 CELA2BP08218 269 aaPredicted RBP5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 MX2P20592 715 aa5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 PHKA2P46019 1235 aa5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 GDF10P55107 478 aa5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 SCARF2Q96GP6 870 aaPredicted RBP5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 CFHR5Q9BXR6 569 aa5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 GPAMQ9HCL2 828 aa5.9□□□□□ -1.46
SCARNA16.2-201ENST00000516520 INHAP05111 366 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 MAP2K3P46734 347 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 SCNN1DP51172 638 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 EML3Q32P44 896 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 EFHC2Q5JST6 749 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 TMEM151AQ8N4L1 468 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 NFATC2IPQ8NCF5 419 aa5.89□□□□□ -1.47
SCARNA16.2-201ENST00000516520 BCRP11274 1271 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 MSX1P28360 303 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 RASSF7Q02833 373 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 KANK3Q6NY19 840 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 TBC1D9Q6ZT07 1266 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 C1orf216Q8TAB5 229 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 LRRC4BQ9NT99 713 aa5.88□□□□□ -1.47
SCARNA16.2-201ENST00000516520 GDF11O95390 407 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 SKIP12755 728 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 UBTFP17480 764 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PLA2G4AP47712 749 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 GSK3AP49840 483 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 NIFKQ9BYG3 293 aaKnown RBP5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 CRISPLD1Q9H336 500 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 ALG2Q9H553 416 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 RUBCNLQ9H714 662 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 NOD1Q9Y239 953 aa5.87□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PHF20L1A8MW92 1017 aa5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PIK3CDO00329 1044 aa5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 STAU1O95793 577 aaKnown RBP5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 SMTNP53814 917 aa5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 FIGNL1Q6PIW4 674 aa5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 NEDD1Q8NHV4 660 aa5.86□□□□□ -1.47
SCARNA16.2-201ENST00000516520 BACH1O14867 736 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 THBS1P07996 1170 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 IRS1P35568 1242 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 NBPF1Q3BBV0 1214 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PODNQ7Z5L7 613 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 ACDQ96AP0 544 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 POM121Q96HA1 1249 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 SLC4A9Q96Q91 983 aa5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 OXCT2Q9BYC2 517 aaPredicted RBP5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 GDF2Q9UK05 429 aaPredicted RBP5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
SCARNA16.2-201ENST00000516520 A6NJY4 79 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 TMEM229AB2RXF0 380 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 CDK2AP1O14519 115 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 TATP17735 454 aaPredicted RBP5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 GTF2IP78347 998 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PSME1Q06323 249 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 UBAP2LQ14157 1087 aaKnown RBP5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 MTFR1Q15390 333 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 KCTD17Q8N5Z5 321 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 ZDHHC3Q9NYG2 299 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 SERTAD1Q9UHV2 236 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 PCDHGA11Q9Y5H2 935 aa5.84□□□□□ -1.47
SCARNA16.2-201ENST00000516520 USP17L5A8MUK1 530 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 OIP5O43482 229 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 NCOA4Q13772 614 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 NLRP8Q86W28 1048 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 TRIM50Q86XT4 487 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 GOLGA6L1Q8N7Z2 621 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 AIDAQ96BJ3 306 aa5.83□□□□□ -1.48
SCARNA16.2-201ENST00000516520 BMP4P12644 408 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 ATP4AP20648 1035 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 FGFR3P22607 806 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 FOXK2Q01167 660 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 PLEKHM2Q8IWE5 1019 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 KLRG1Q96E93 195 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 ABHD17AQ96GS6 310 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 NDFIP2Q9NV92 336 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 CABP1Q9NZU7 370 aa5.82□□□□□ -1.48
SCARNA16.2-201ENST00000516520 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms