RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 TRAIPQ9BWF2 469 aa11.93□□□□□ -0.5
SNORA48.9-201ENST00000516419 ZNF395Q9H8N7 513 aaPredicted RBP11.93□□□□□ -0.5
SNORA48.9-201ENST00000516419 IL2RAP01589 272 aa11.92□□□□□ -0.5
SNORA48.9-201ENST00000516419 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
SNORA48.9-201ENST00000516419 CNKSR1Q969H4 720 aa11.92□□□□□ -0.5
SNORA48.9-201ENST00000516419 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
SNORA48.9-201ENST00000516419 SERTAD1Q9UHV2 236 aa11.92□□□□□ -0.5
SNORA48.9-201ENST00000516419 AXIN1O15169 862 aa11.91□□□□□ -0.5
SNORA48.9-201ENST00000516419 MEN1O00255 615 aa11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 SPINT1O43278 529 aa11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 MRPL14Q6P1L8 145 aaKnown RBP11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 NLRP3Q96P20 1036 aa11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 HRH3Q9Y5N1 445 aa11.9□□□□□ -0.5
SNORA48.9-201ENST00000516419 CARNS1A5YM72 827 aa11.89□□□□□ -0.51
SNORA48.9-201ENST00000516419 SMTNP53814 917 aa11.89□□□□□ -0.51
SNORA48.9-201ENST00000516419 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
SNORA48.9-201ENST00000516419 A6NJY4 79 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 BMP2P12643 396 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 CENPCQ03188 943 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 SCARF1Q14162 830 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 MTFR1Q15390 333 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
SNORA48.9-201ENST00000516419 EPHA4P54764 986 aa11.86□□□□□ -0.51
SNORA48.9-201ENST00000516419 TLR1Q15399 786 aa11.86□□□□□ -0.51
SNORA48.9-201ENST00000516419 C6orf118Q5T5N4 469 aa11.86□□□□□ -0.51
SNORA48.9-201ENST00000516419 INSM2Q96T92 566 aaPredicted RBP11.86□□□□□ -0.51
SNORA48.9-201ENST00000516419 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
SNORA48.9-201ENST00000516419 BMP1P13497 986 aa11.85□□□□□ -0.51
SNORA48.9-201ENST00000516419 GPC1P35052 558 aa11.85□□□□□ -0.51
SNORA48.9-201ENST00000516419 RNF144AP50876 292 aaPredicted RBP11.85□□□□□ -0.51
SNORA48.9-201ENST00000516419 TRIM46Q7Z4K8 759 aa11.85□□□□□ -0.51
SNORA48.9-201ENST00000516419 FHDC1Q9C0D6 1143 aaPredicted RBP11.85□□□□□ -0.51
SNORA48.9-201ENST00000516419 CDK2AP1O14519 115 aa11.84□□□□□ -0.51
SNORA48.9-201ENST00000516419 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
SNORA48.9-201ENST00000516419 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
SNORA48.9-201ENST00000516419 POLMQ9NP87 494 aaPredicted RBP11.84□□□□□ -0.51
SNORA48.9-201ENST00000516419 SCHIP1Q9P0W5 487 aaPredicted RBP11.84□□□□□ -0.51
SNORA48.9-201ENST00000516419 FOXK2Q01167 660 aa11.83□□□□□ -0.52
SNORA48.9-201ENST00000516419 SLAIN2Q9P270 581 aa11.83□□□□□ -0.52
SNORA48.9-201ENST00000516419 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 WEE1P30291 646 aa11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 CTSOP43234 321 aaPredicted RBP11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 GAS2L2Q8NHY3 880 aa11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 ZSCAN10Q96SZ4 725 aaPredicted RBP11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 GRIP2Q9C0E4 1043 aa11.82□□□□□ -0.52
SNORA48.9-201ENST00000516419 PRMT3O60678 531 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 LGR5O75473 907 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 BRD1O95696 1058 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 OCLNQ16625 522 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 SLC27A3Q5K4L6 730 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 TSPAN10Q9H1Z9 355 aaPredicted RBP11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 ATP13A2Q9NQ11 1180 aa11.81□□□□□ -0.52
SNORA48.9-201ENST00000516419 ATAD2Q6PL18 1390 aa11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 IGFBP4P22692 258 aa11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 ZFP42Q96MM3 310 aa11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 CXXC1Q9P0U4 656 aaPredicted RBP11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 IQSEC3Q9UPP2 1182 aaPredicted RBP11.8□□□□□ -0.52
SNORA48.9-201ENST00000516419 SSFA2P28290 1259 aa11.79□□□□□ -0.52
SNORA48.9-201ENST00000516419 TMEM214Q6NUQ4 689 aaKnown RBP11.79□□□□□ -0.52
SNORA48.9-201ENST00000516419 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
SNORA48.9-201ENST00000516419 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
SNORA48.9-201ENST00000516419 TTLL8A6PVC2 850 aa11.78□□□□□ -0.52
SNORA48.9-201ENST00000516419 KCTD17Q8N5Z5 321 aa11.78□□□□□ -0.52
SNORA48.9-201ENST00000516419 RNF217Q8TC41 542 aa11.78□□□□□ -0.52
SNORA48.9-201ENST00000516419 SOS2Q07890 1332 aaPredicted RBP11.78□□□□□ -0.52
SNORA48.9-201ENST00000516419 C21orf2O43822 256 aa11.77□□□□□ -0.53
SNORA48.9-201ENST00000516419 C1orf216Q8TAB5 229 aa11.77□□□□□ -0.53
SNORA48.9-201ENST00000516419 RHBDD1Q8TEB9 315 aa11.77□□□□□ -0.53
SNORA48.9-201ENST00000516419 USP3Q9Y6I4 520 aa11.77□□□□□ -0.53
SNORA48.9-201ENST00000516419 SPATA31C2B4DYI2 1134 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 FOXO3O43524 673 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 PPP1R12BO60237 982 aaPredicted RBP11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 TBCELQ5QJ74 424 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 Q6ZNB5 142 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 DACH1Q9UI36 760 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
SNORA48.9-201ENST00000516419 TEAD4Q15561 434 aa11.75□□□□□ -0.53
SNORA48.9-201ENST00000516419 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
SNORA48.9-201ENST00000516419 NIFKQ9BYG3 293 aaKnown RBP11.75□□□□□ -0.53
SNORA48.9-201ENST00000516419 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
SNORA48.9-201ENST00000516419 TAS1R3Q7RTX0 852 aa11.74□□□□□ -0.53
SNORA48.9-201ENST00000516419 ZNF295-AS1Q8N0V1 137 aa11.74□□□□□ -0.53
SNORA48.9-201ENST00000516419 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
SNORA48.9-201ENST00000516419 KCNA1Q09470 495 aa11.73□□□□□ -0.53
SNORA48.9-201ENST00000516419 PRICKLE2Q7Z3G6 844 aa11.73□□□□□ -0.53
SNORA48.9-201ENST00000516419 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
SNORA48.9-201ENST00000516419 SENP2Q9HC62 589 aa11.73□□□□□ -0.53
SNORA48.9-201ENST00000516419 SERTM1A2A2V5 107 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms