RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 RIPOR1Q6ZS17 1223 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 VWA5B2Q8N398 1253 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 GAS2L1Q99501 681 aaPredicted RBP6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 TIMMDC1Q9NPL8 285 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 TFIP11Q9UBB9 837 aaKnown RBP6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 GTF3C3Q9Y5Q9 886 aa6.8□□□□□ -1.32
SNORA40.12-201ENST00000516329 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 SPATA31C2B4DYI2 1134 aa6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 LZTS3O60299 673 aaPredicted RBP6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 PLEKHM2Q8IWE5 1019 aa6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 GPR161Q8N6U8 529 aaKnown RBP6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
SNORA40.12-201ENST00000516329 C4orf17Q53FE4 359 aa6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 TRIM50Q86XT4 487 aa6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 DYRK1BQ9Y463 629 aa6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 MAFBQ9Y5Q3 323 aaPredicted RBP6.78□□□□□ -1.32
SNORA40.12-201ENST00000516329 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 PLA2G4AP47712 749 aa6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 SMTNP53814 917 aa6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 CLDN10P78369 228 aa6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 NANOS1Q8WY41 292 aaKnown RBP6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 GPAMQ9HCL2 828 aa6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZNF358Q9NW07 568 aa6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 MKRN1Q9UHC7 482 aaKnown RBP6.77□□□□□ -1.33
SNORA40.12-201ENST00000516329 ATP1A2P50993 1020 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 INSM1Q01101 510 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 PPARGC1BQ86YN6 1023 aaKnown RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 TPCN2Q8NHX9 752 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 RHBDD1Q8TEB9 315 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZNF594Q96JF6 807 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 COL25A1Q9BXS0 654 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 PPP1R12CQ9BZL4 782 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 DNAAF2Q9NVR5 837 aaKnown RBP6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 USP3Q9Y6I4 520 aa6.76□□□□□ -1.33
SNORA40.12-201ENST00000516329 KRT76Q01546 638 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 WDR44Q5JSH3 913 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 RNFT1Q5M7Z0 435 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 TRIM22Q8IYM9 498 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
SNORA40.12-201ENST00000516329 A0A1B0GTH6 734 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 A6NJY4 79 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 GPR25O00155 361 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 BACH1O14867 736 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 F11P03951 625 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 RASA1P20936 1047 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 LMOD1P29536 600 aaPredicted RBP6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 DBN1Q16643 649 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 TBCELQ5QJ74 424 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 CCDC102BQ68D86 513 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 SLC4A9Q96Q91 983 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZMYND15Q9H091 742 aa6.74□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZBTB7BO15156 539 aaPredicted RBP6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 MSX1P28360 303 aa6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 MTFR1Q15390 333 aa6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 NIFKQ9BYG3 293 aaKnown RBP6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 RUBCNLQ9H714 662 aa6.73□□□□□ -1.33
SNORA40.12-201ENST00000516329 SFI1A8K8P3 1242 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 H7C1W4 665 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 LARGE2Q8N3Y3 721 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 AIDAQ96BJ3 306 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 CABP1Q9NZU7 370 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 IQSEC3Q9UPP2 1182 aaPredicted RBP6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 PARP3Q9Y6F1 533 aa6.72□□□□□ -1.33
SNORA40.12-201ENST00000516329 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 THBS1P07996 1170 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 RFX1P22670 979 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 GAS6Q14393 721 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 CFAP70Q5T0N1 1121 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 LARP1Q6PKG0 1096 aaKnown RBP6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 SLC9A9Q8IVB4 645 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 PGBD3Q8N328 593 aa6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 SCHIP1Q9P0W5 487 aaPredicted RBP6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 RBM19Q9Y4C8 960 aaKnown RBP6.71□□□□□ -1.34
SNORA40.12-201ENST00000516329 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 EPHA4P54764 986 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 KANK4Q5T7N3 995 aaPredicted RBP6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 FOXR1Q6PIV2 292 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 SIX5Q8N196 739 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 TSEN2Q8NCE0 465 aaKnown RBP6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
SNORA40.12-201ENST00000516329 ARID3CA6NKF2 412 aa6.69□□□□□ -1.34
SNORA40.12-201ENST00000516329 USP17L15C9J2P7 530 aa6.69□□□□□ -1.34
SNORA40.12-201ENST00000516329 USP17L10C9JJH3 530 aa6.69□□□□□ -1.34
SNORA40.12-201ENST00000516329 USP17L13C9JLJ4 530 aa6.69□□□□□ -1.34
SNORA40.12-201ENST00000516329 USP17L12C9JPN9 530 aa6.69□□□□□ -1.34
SNORA40.12-201ENST00000516329 USP17L11C9JVI0 530 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms