RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
PDE4D-215ENST00000506510 KIAA1024Q9UPX6 916 aa9.66□□□□□ -0.86
PDE4D-215ENST00000506510 SPATA31C2B4DYI2 1134 aa9.65□□□□□ -0.86
PDE4D-215ENST00000506510 WASLO00401 505 aaPredicted RBP9.65□□□□□ -0.86
PDE4D-215ENST00000506510 ITGA6P23229 1130 aa9.65□□□□□ -0.86
PDE4D-215ENST00000506510 CLDN10P78369 228 aa9.65□□□□□ -0.86
PDE4D-215ENST00000506510 TAS1R3Q7RTX0 852 aa9.65□□□□□ -0.86
PDE4D-215ENST00000506510 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
PDE4D-215ENST00000506510 PHKA2P46019 1235 aa9.64□□□□□ -0.87
PDE4D-215ENST00000506510 OGFOD1Q8N543 542 aa9.64□□□□□ -0.87
PDE4D-215ENST00000506510 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDE4D-215ENST00000506510 CDC14CA4D256 554 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 VSIG8P0DPA2 414 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 GMPRP36959 345 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 ATP1A2P50993 1020 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 GNASQ5JWF2 1037 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 ZNF594Q96JF6 807 aaPredicted RBP9.63□□□□□ -0.87
PDE4D-215ENST00000506510 TIMMDC1Q9NPL8 285 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
PDE4D-215ENST00000506510 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-215ENST00000506510 SMTNP53814 917 aa9.62□□□□□ -0.87
PDE4D-215ENST00000506510 C4orf17Q53FE4 359 aa9.62□□□□□ -0.87
PDE4D-215ENST00000506510 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
PDE4D-215ENST00000506510 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
PDE4D-215ENST00000506510 GAS2L1Q99501 681 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-215ENST00000506510 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
PDE4D-215ENST00000506510 CUEDC1Q9NWM3 386 aaPredicted RBP9.62□□□□□ -0.87
PDE4D-215ENST00000506510 ZBTB7BO15156 539 aaPredicted RBP9.61□□□□□ -0.87
PDE4D-215ENST00000506510 CFAP70Q5T0N1 1121 aa9.61□□□□□ -0.87
PDE4D-215ENST00000506510 CCDC102BQ68D86 513 aa9.61□□□□□ -0.87
PDE4D-215ENST00000506510 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
PDE4D-215ENST00000506510 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
PDE4D-215ENST00000506510 USP3Q9Y6I4 520 aa9.61□□□□□ -0.87
PDE4D-215ENST00000506510 A6NJY4 79 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 RASA1P20936 1047 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 WDR44Q5JSH3 913 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 RIPOR1Q6ZS17 1223 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 VWA5B2Q8N398 1253 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 SLC4A9Q96Q91 983 aa9.6□□□□□ -0.87
PDE4D-215ENST00000506510 BACH1O14867 736 aa9.59□□□□□ -0.87
PDE4D-215ENST00000506510 WIPF1O43516 503 aa9.59□□□□□ -0.87
PDE4D-215ENST00000506510 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
PDE4D-215ENST00000506510 LARGE2Q8N3Y3 721 aa9.59□□□□□ -0.87
PDE4D-215ENST00000506510 GPR161Q8N6U8 529 aaKnown RBP9.59□□□□□ -0.87
PDE4D-215ENST00000506510 NANOS1Q8WY41 292 aaKnown RBP9.59□□□□□ -0.87
PDE4D-215ENST00000506510 MTFR1Q15390 333 aa9.58□□□□□ -0.88
PDE4D-215ENST00000506510 CRTC2Q53ET0 693 aaPredicted RBP9.58□□□□□ -0.88
PDE4D-215ENST00000506510 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
PDE4D-215ENST00000506510 SIX5Q8N196 739 aa9.58□□□□□ -0.88
PDE4D-215ENST00000506510 GPAMQ9HCL2 828 aa9.58□□□□□ -0.88
PDE4D-215ENST00000506510 RFX1P22670 979 aa9.57□□□□□ -0.88
PDE4D-215ENST00000506510 SV2AQ7L0J3 742 aa9.57□□□□□ -0.88
PDE4D-215ENST00000506510 ZNF837Q96EG3 531 aaPredicted RBP9.57□□□□□ -0.88
PDE4D-215ENST00000506510 IQSEC3Q9UPP2 1182 aaPredicted RBP9.57□□□□□ -0.88
PDE4D-215ENST00000506510 A0A1B0GTH6 734 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 SFI1A8K8P3 1242 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 DKK1O94907 266 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 EPHA4P54764 986 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
PDE4D-215ENST00000506510 TNS4Q8IZW8 715 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 NIFKQ9BYG3 293 aaKnown RBP9.56□□□□□ -0.88
PDE4D-215ENST00000506510 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L15C9J2P7 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L13C9JLJ4 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L11C9JVI0 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L21D6R901 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L18D6R9N7 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L22D6RA61 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L17D6RBQ6 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L19D6RCP7 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L20D6RJB6 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 CDK2AP1O14519 115 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 F11P03951 625 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 USP17L24Q0WX57 530 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 DBN1Q16643 649 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 CABP1Q9NZU7 370 aa9.55□□□□□ -0.88
PDE4D-215ENST00000506510 SCHIP1Q9P0W5 487 aaPredicted RBP9.55□□□□□ -0.88
PDE4D-215ENST00000506510 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
PDE4D-215ENST00000506510 PTK7Q13308 1070 aa9.54□□□□□ -0.88
PDE4D-215ENST00000506510 CDCA8Q53HL2 280 aa9.54□□□□□ -0.88
PDE4D-215ENST00000506510 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
PDE4D-215ENST00000506510 ZNF295-AS1Q8N0V1 137 aa9.54□□□□□ -0.88
PDE4D-215ENST00000506510 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
PDE4D-215ENST00000506510 H7C1W4 665 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 GPR25O00155 361 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 MSX1P28360 303 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 FOXK2Q01167 660 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 KRT76Q01546 638 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 COL25A1Q9BXS0 654 aaPredicted RBP9.53□□□□□ -0.88
PDE4D-215ENST00000506510 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
PDE4D-215ENST00000506510 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
PDE4D-215ENST00000506510 DPYDQ12882 1025 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms