RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 ZNF777Q9ULD5 760 aaPredicted RBP7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 CDC14CA4D256 554 aa7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 SPATA31C2B4DYI2 1134 aa7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TAS1R3Q7RTX0 852 aa7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 CUEDC1Q9NWM3 386 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 SERTAD1Q9UHV2 236 aa7.58□□□□□ -1.2
PDLIM1P4-201ENST00000504327 PHKA2P46019 1235 aa7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TMEM214Q6NUQ4 689 aaKnown RBP7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 GPR161Q8N6U8 529 aaKnown RBP7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TFIP11Q9UBB9 837 aaKnown RBP7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 KIAA1024Q9UPX6 916 aa7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 MAFBQ9Y5Q3 323 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1P4-201ENST00000504327 PALM3A6NDB9 673 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P4-201ENST00000504327 CLDN10P78369 228 aa7.56□□□□□ -1.2
PDLIM1P4-201ENST00000504327 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
PDLIM1P4-201ENST00000504327 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TIMMDC1Q9NPL8 285 aa7.56□□□□□ -1.2
PDLIM1P4-201ENST00000504327 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 GNASQ5JWF2 1037 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 NANOS1Q8WY41 292 aaKnown RBP7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 PPP1R12CQ9BZL4 782 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 DYRK1BQ9Y463 629 aa7.55□□□□□ -1.2
PDLIM1P4-201ENST00000504327 SMTNP53814 917 aa7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
PDLIM1P4-201ENST00000504327 PLA2G4AP47712 749 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 ATP1A2P50993 1020 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 KRT76Q01546 638 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 OGFOD1Q8N543 542 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 ZMYND15Q9H091 742 aa7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
PDLIM1P4-201ENST00000504327 A6NJY4 79 aa7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 ZBTB7BO15156 539 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 MTFR1Q15390 333 aa7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 TRIM22Q8IYM9 498 aa7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 COL25A1Q9BXS0 654 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 IQSEC3Q9UPP2 1182 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1P4-201ENST00000504327 LMOD1P29536 600 aaPredicted RBP7.51□□□□□ -1.21
PDLIM1P4-201ENST00000504327 DBN1Q16643 649 aa7.51□□□□□ -1.21
PDLIM1P4-201ENST00000504327 RNFT1Q5M7Z0 435 aa7.51□□□□□ -1.21
PDLIM1P4-201ENST00000504327 C14orf37Q86TY3 774 aa7.51□□□□□ -1.21
PDLIM1P4-201ENST00000504327 A0A1B0GTH6 734 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 GPR25O00155 361 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 BACH1O14867 736 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 F11P03951 625 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 THBS1P07996 1170 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CFAP70Q5T0N1 1121 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CNTNAP3BQ96NU0 1288 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
PDLIM1P4-201ENST00000504327 DKK1O94907 266 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 RASA1P20936 1047 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 LORP23490 312 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 MSX1P28360 303 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 EPHA4P54764 986 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 SIX5Q8N196 739 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 LARGE2Q8N3Y3 721 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 NUCKS1Q9H1E3 243 aaKnown RBP7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 RUBCNLQ9H714 662 aa7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
PDLIM1P4-201ENST00000504327 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 H7C1W4 665 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CDK2AP1O14519 115 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 GAS6Q14393 721 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 KANK4Q5T7N3 995 aaPredicted RBP7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 SLC9A9Q8IVB4 645 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 CABP1Q9NZU7 370 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 PARP3Q9Y6F1 533 aa7.48□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L15C9J2P7 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L13C9JLJ4 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L12C9JPN9 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L11C9JVI0 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L21D6R901 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L18D6R9N7 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L22D6RA61 530 aa7.47□□□□□ -1.21
PDLIM1P4-201ENST00000504327 USP17L17D6RBQ6 530 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms