RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 TRAK2O60296 914 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 THBS1P07996 1170 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 TMEM259Q4ZIN3 620 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 GOLGA6L1Q8N7Z2 621 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 ZNF592Q92610 1267 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 OSBPL3Q9H4L5 887 aa6.22□□□□□ -1.41
SGMS1-205ENST00000498514 GNRH1P01148 92 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 CSB-PGBD3P0DP91 1061 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 PHKA2P46019 1235 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 CENPCQ03188 943 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 GRIN2CQ14957 1233 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 PGBD3Q8N328 593 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 CNKSR1Q969H4 720 aa6.21□□□□□ -1.42
SGMS1-205ENST00000498514 BMP4P12644 408 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 AMPD1P23109 780 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
SGMS1-205ENST00000498514 LBRQ14739 615 aaKnown RBP6.2□□□□□ -1.42
SGMS1-205ENST00000498514 LINC00114Q6XXX2 140 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
SGMS1-205ENST00000498514 ESYT1Q9BSJ8 1104 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 RAB6BQ9NRW1 208 aa6.2□□□□□ -1.42
SGMS1-205ENST00000498514 ATXN7L1Q9ULK2 861 aaPredicted RBP6.2□□□□□ -1.42
SGMS1-205ENST00000498514 GJD4Q96KN9 370 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-205ENST00000498514 SUV39H2Q9H5I1 410 aa6.19□□□□□ -1.42
SGMS1-205ENST00000498514 ZNF330Q9Y3S2 320 aaPredicted RBP6.19□□□□□ -1.42
SGMS1-205ENST00000498514 C1QTNF9BB2RNN3 333 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 GNB5O14775 395 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 IL2RAP01589 272 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 HOXB4P17483 251 aaPredicted RBP6.18□□□□□ -1.42
SGMS1-205ENST00000498514 NR1H3Q13133 447 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 UBAP2LQ14157 1087 aaKnown RBP6.18□□□□□ -1.42
SGMS1-205ENST00000498514 EFHC2Q5JST6 749 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 GNASQ5JWF2 1037 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 TMEM214Q6NUQ4 689 aaKnown RBP6.18□□□□□ -1.42
SGMS1-205ENST00000498514 SLCO4C1Q6ZQN7 724 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 RUBCNLQ9H714 662 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
SGMS1-205ENST00000498514 C2CD2LO14523 706 aa6.17□□□□□ -1.42
SGMS1-205ENST00000498514 MYCP01106 439 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-205ENST00000498514 ABHD17AQ96GS6 310 aa6.17□□□□□ -1.42
SGMS1-205ENST00000498514 XAGE2Q96GT9 111 aa6.17□□□□□ -1.42
SGMS1-205ENST00000498514 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
SGMS1-205ENST00000498514 PCMTD1Q96MG8 357 aaPredicted RBP6.17□□□□□ -1.42
SGMS1-205ENST00000498514 FGFR3P22607 806 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 MSX1P28360 303 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 C4orf17Q53FE4 359 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 CD163Q86VB7 1156 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 PSMG3-AS1Q96PY0 264 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 GOPCQ9HD26 462 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 NOP53Q9NZM5 478 aaKnown RBP6.16□□□□□ -1.42
SGMS1-205ENST00000498514 HRH3Q9Y5N1 445 aa6.16□□□□□ -1.42
SGMS1-205ENST00000498514 BNIP3LO60238 219 aa6.15□□□□□ -1.42
SGMS1-205ENST00000498514 EPXP11678 715 aa6.15□□□□□ -1.42
SGMS1-205ENST00000498514 CTBSQ01459 385 aa6.15□□□□□ -1.42
SGMS1-205ENST00000498514 FHDC1Q9C0D6 1143 aaPredicted RBP6.15□□□□□ -1.42
SGMS1-205ENST00000498514 NDFIP2Q9NV92 336 aa6.15□□□□□ -1.42
SGMS1-205ENST00000498514 ARAFP10398 606 aa6.14□□□□□ -1.43
SGMS1-205ENST00000498514 ESCO1Q5FWF5 840 aa6.14□□□□□ -1.43
SGMS1-205ENST00000498514 NEURL1BA8MQ27 555 aa6.13□□□□□ -1.43
SGMS1-205ENST00000498514 CHRNA4P43681 627 aa6.13□□□□□ -1.43
SGMS1-205ENST00000498514 DGKGP49619 791 aa6.13□□□□□ -1.43
SGMS1-205ENST00000498514 RNF135Q8IUD6 432 aa6.13□□□□□ -1.43
SGMS1-205ENST00000498514 CDCA7Q9BWT1 371 aaPredicted RBP6.13□□□□□ -1.43
SGMS1-205ENST00000498514 CRISPLD1Q9H336 500 aa6.13□□□□□ -1.43
SGMS1-205ENST00000498514 FIGNL1Q6PIW4 674 aa6.12□□□□□ -1.43
SGMS1-205ENST00000498514 RHBDD1Q8TEB9 315 aa6.12□□□□□ -1.43
SGMS1-205ENST00000498514 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
SGMS1-205ENST00000498514 CEP126Q9P2H0 1117 aa6.12□□□□□ -1.43
SGMS1-205ENST00000498514 DOC2BQ14184 412 aa6.11□□□□□ -1.43
SGMS1-205ENST00000498514 PPARGC1BQ86YN6 1023 aaKnown RBP6.11□□□□□ -1.43
SGMS1-205ENST00000498514 CCDC85AQ96PX6 553 aaPredicted RBP6.11□□□□□ -1.43
SGMS1-205ENST00000498514 ZCCHC2Q9C0B9 1178 aaKnown RBP6.11□□□□□ -1.43
SGMS1-205ENST00000498514 PCDHGC4Q9Y5F7 938 aa6.11□□□□□ -1.43
SGMS1-205ENST00000498514 TBC1D9Q6ZT07 1266 aa6.1□□□□□ -1.43
SGMS1-205ENST00000498514 CHSY3Q70JA7 882 aa6.1□□□□□ -1.43
SGMS1-205ENST00000498514 NLRP8Q86W28 1048 aa6.1□□□□□ -1.43
SGMS1-205ENST00000498514 NDUFB9Q9Y6M9 179 aa6.1□□□□□ -1.43
SGMS1-205ENST00000498514 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.09□□□□□ -1.43
SGMS1-205ENST00000498514 ITGB7P26010 798 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 ADH6P28332 368 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 USP4Q13107 963 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 TLR1Q15399 786 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 KRTAP9-2Q9BYQ4 174 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 ETNK1Q9HBU6 452 aa6.09□□□□□ -1.43
SGMS1-205ENST00000498514 DNAAF2Q9NVR5 837 aaKnown RBP6.09□□□□□ -1.43
SGMS1-205ENST00000498514 ATXN7O15265 892 aaPredicted RBP6.08□□□□□ -1.44
SGMS1-205ENST00000498514 GATA4P43694 442 aa6.08□□□□□ -1.44
SGMS1-205ENST00000498514 PLA2G4AP47712 749 aa6.08□□□□□ -1.44
SGMS1-205ENST00000498514 ZMYM1Q5SVZ6 1142 aa6.08□□□□□ -1.44
SGMS1-205ENST00000498514 BANK1Q8NDB2 785 aa6.08□□□□□ -1.44
SGMS1-205ENST00000498514 C1orf216Q8TAB5 229 aa6.08□□□□□ -1.44
SGMS1-205ENST00000498514 APBB1O00213 710 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 SOCS7O14512 581 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 GPR37L1O60883 481 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 FAM182BQ5T319 152 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 AIDAQ96BJ3 306 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 AVENQ9NQS1 362 aaPredicted RBP6.07□□□□□ -1.44
SGMS1-205ENST00000498514 KLF15Q9UIH9 416 aa6.07□□□□□ -1.44
SGMS1-205ENST00000498514 DOLKQ9UPQ8 538 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms