RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RELBQ01201 579 aa7.25□□□□□ -1.25
CD46-216ENST00000490278 TSEN2Q8NCE0 465 aaKnown RBP7.25□□□□□ -1.25
CD46-216ENST00000490278 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
CD46-216ENST00000490278 XAGE2Q96GT9 111 aa7.25□□□□□ -1.25
CD46-216ENST00000490278 HINFPQ9BQA5 517 aa7.25□□□□□ -1.25
CD46-216ENST00000490278 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
CD46-216ENST00000490278 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
CD46-216ENST00000490278 IL2RAP01589 272 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 CLN3Q13286 438 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 CNKSR1Q969H4 720 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 SLC4A9Q96Q91 983 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 ESYT1Q9BSJ8 1104 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
CD46-216ENST00000490278 AAASQ9NRG9 546 aa7.24□□□□□ -1.25
CD46-216ENST00000490278 MEN1O00255 615 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 ST8SIA5O15466 376 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 UPP2O95045 317 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 BRD1O95696 1058 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 CTC1Q2NKJ3 1217 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 LINC00528Q8N1L1 170 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
CD46-216ENST00000490278 PRMT3O60678 531 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 SSFA2P28290 1259 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 SMTNP53814 917 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 TNS4Q8IZW8 715 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 SLAIN2Q9P270 581 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 HRH3Q9Y5N1 445 aa7.22□□□□□ -1.25
CD46-216ENST00000490278 A6NJY4 79 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 SPINT1O43278 529 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 LGR5O75473 907 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 ATP2B4P23634 1241 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
CD46-216ENST00000490278 EPHA4P54764 986 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 CENPCQ03188 943 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 TLR1Q15399 786 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 MRPL14Q6P1L8 145 aaKnown RBP7.21□□□□□ -1.26
CD46-216ENST00000490278 AEBP1Q8IUX7 1158 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 PRIMPOLQ96LW4 560 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 STK17AQ9UEE5 414 aa7.21□□□□□ -1.26
CD46-216ENST00000490278 AXIN1O15169 862 aa7.2□□□□□ -1.26
CD46-216ENST00000490278 BMP2P12643 396 aa7.2□□□□□ -1.26
CD46-216ENST00000490278 WEE1P30291 646 aa7.2□□□□□ -1.26
CD46-216ENST00000490278 MTFR1Q15390 333 aa7.2□□□□□ -1.26
CD46-216ENST00000490278 OCLNQ16625 522 aa7.2□□□□□ -1.26
CD46-216ENST00000490278 CXXC1Q9P0U4 656 aaPredicted RBP7.2□□□□□ -1.26
CD46-216ENST00000490278 SCHIP1Q9P0W5 487 aaPredicted RBP7.2□□□□□ -1.26
CD46-216ENST00000490278 CDK2AP1O14519 115 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 WFS1O76024 890 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 IGFBP4P22692 258 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 FOXK2Q01167 660 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 KCNA1Q09470 495 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 PHLDB3Q6NSJ2 640 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 CRIPAKQ8N1N5 446 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 GAS2L2Q8NHY3 880 aa7.19□□□□□ -1.26
CD46-216ENST00000490278 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
CD46-216ENST00000490278 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
CD46-216ENST00000490278 TSPAN10Q9H1Z9 355 aaPredicted RBP7.19□□□□□ -1.26
CD46-216ENST00000490278 POLMQ9NP87 494 aaPredicted RBP7.19□□□□□ -1.26
CD46-216ENST00000490278 PATL2C9JE40 543 aaKnown RBP7.18□□□□□ -1.26
CD46-216ENST00000490278 GPC1P35052 558 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 RNF144AP50876 292 aaPredicted RBP7.18□□□□□ -1.26
CD46-216ENST00000490278 SCARF1Q14162 830 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 C6orf118Q5T5N4 469 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 SLC9A9Q8IVB4 645 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 NBPF15Q8N660 670 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 C1orf216Q8TAB5 229 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 SCG3Q8WXD2 468 aaKnown RBP7.18□□□□□ -1.26
CD46-216ENST00000490278 ATAD2Q6PL18 1390 aa7.18□□□□□ -1.26
CD46-216ENST00000490278 ZBTB7CA1YPR0 619 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 WIPF1O43516 503 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 C21orf2O43822 256 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 BMP1P13497 986 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 GTF2E1P29083 439 aaPredicted RBP7.17□□□□□ -1.26
CD46-216ENST00000490278 CTSOP43234 321 aaPredicted RBP7.17□□□□□ -1.26
CD46-216ENST00000490278 SLC27A3Q5K4L6 730 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 TRIM46Q7Z4K8 759 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 PURBQ96QR8 312 aaKnown RBP7.17□□□□□ -1.26
CD46-216ENST00000490278 ZSCAN10Q96SZ4 725 aaPredicted RBP7.17□□□□□ -1.26
CD46-216ENST00000490278 DACH1Q9UI36 760 aa7.17□□□□□ -1.26
CD46-216ENST00000490278 IQSEC3Q9UPP2 1182 aaPredicted RBP7.17□□□□□ -1.26
CD46-216ENST00000490278 FOXO3O43524 673 aa7.16□□□□□ -1.26
CD46-216ENST00000490278 PPP1R12BO60237 982 aaPredicted RBP7.16□□□□□ -1.26
CD46-216ENST00000490278 PSMA6P60900 246 aaKnown RBP7.16□□□□□ -1.26
CD46-216ENST00000490278 NFX1Q12986 1120 aaKnown RBP7.16□□□□□ -1.26
CD46-216ENST00000490278 TBCELQ5QJ74 424 aa7.16□□□□□ -1.26
CD46-216ENST00000490278 TMEM214Q6NUQ4 689 aaKnown RBP7.16□□□□□ -1.26
CD46-216ENST00000490278 PPARGC1BQ86YN6 1023 aaKnown RBP7.16□□□□□ -1.26
CD46-216ENST00000490278 GRIP2Q9C0E4 1043 aa7.16□□□□□ -1.26
CD46-216ENST00000490278 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
CD46-216ENST00000490278 ARID4AP29374 1257 aaPredicted RBP7.15□□□□□ -1.26
CD46-216ENST00000490278 TRIM26Q12899 539 aaPredicted RBP7.15□□□□□ -1.26
CD46-216ENST00000490278 FKBP5Q13451 457 aaPredicted RBP7.15□□□□□ -1.26
CD46-216ENST00000490278 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.26
CD46-216ENST00000490278 TAS1R3Q7RTX0 852 aa7.15□□□□□ -1.26
CD46-216ENST00000490278 RHBDD1Q8TEB9 315 aa7.15□□□□□ -1.26
CD46-216ENST00000490278 CHMP7Q8WUX9 453 aaPredicted RBP7.15□□□□□ -1.26
CD46-216ENST00000490278 CHMP3Q9Y3E7 222 aa7.15□□□□□ -1.26
CD46-216ENST00000490278 TEAD4Q15561 434 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms