RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 PGBD3Q8N328 593 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 KLRG1Q96E93 195 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 NOP53Q9NZM5 478 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 PCDHB9Q9Y5E1 797 aa8.18□□□□□ -1.1
R3HDM1-212ENST00000456040 CLN3Q13286 438 aa8.17□□□□□ -1.1
R3HDM1-212ENST00000456040 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 GNB5O14775 395 aa8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 BMP4P12644 408 aa8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
R3HDM1-212ENST00000456040 APBB1O00213 710 aa8.15□□□□□ -1.1
R3HDM1-212ENST00000456040 SOCS7O14512 581 aa8.15□□□□□ -1.1
R3HDM1-212ENST00000456040 ERVK-9P63128 1117 aa8.15□□□□□ -1.1
R3HDM1-212ENST00000456040 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 ZBBXA8MT70 800 aa8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 COL8A1P27658 744 aa8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 LBRQ14739 615 aaKnown RBP8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 GPAMQ9HCL2 828 aa8.14□□□□□ -1.11
R3HDM1-212ENST00000456040 C1QTNF9BB2RNN3 333 aa8.13□□□□□ -1.11
R3HDM1-212ENST00000456040 EFHC2Q5JST6 749 aa8.13□□□□□ -1.11
R3HDM1-212ENST00000456040 GNASQ5JWF2 1037 aa8.13□□□□□ -1.11
R3HDM1-212ENST00000456040 ZNF330Q9Y3S2 320 aaPredicted RBP8.13□□□□□ -1.11
R3HDM1-212ENST00000456040 MTMR14Q8NCE2 650 aa8.12□□□□□ -1.11
R3HDM1-212ENST00000456040 SEMA6BQ9H3T3 888 aa8.12□□□□□ -1.11
R3HDM1-212ENST00000456040 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
R3HDM1-212ENST00000456040 SNRKQ9NRH2 765 aa8.12□□□□□ -1.11
R3HDM1-212ENST00000456040 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
R3HDM1-212ENST00000456040 GNRH1P01148 92 aa8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 TMEM132AQ24JP5 1023 aa8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 SLCO4C1Q6ZQN7 724 aa8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 ZSCAN10Q96SZ4 725 aaPredicted RBP8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
R3HDM1-212ENST00000456040 PHKA2P46019 1235 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 TMEM214Q6NUQ4 689 aaKnown RBP8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 CD163Q86VB7 1156 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 SUV39H2Q9H5I1 410 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 PRM3Q9NNZ6 103 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 GGA1Q9UJY5 639 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 PCDHB11Q9Y5F2 797 aa8.09□□□□□ -1.11
R3HDM1-212ENST00000456040 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
R3HDM1-212ENST00000456040 MYCP01106 439 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-212ENST00000456040 FGFR3P22607 806 aa8.07□□□□□ -1.12
R3HDM1-212ENST00000456040 CENPCQ03188 943 aa8.07□□□□□ -1.12
R3HDM1-212ENST00000456040 DOC2BQ14184 412 aa8.06□□□□□ -1.12
R3HDM1-212ENST00000456040 ESCO1Q5FWF5 840 aa8.06□□□□□ -1.12
R3HDM1-212ENST00000456040 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
R3HDM1-212ENST00000456040 RAB6BQ9NRW1 208 aa8.06□□□□□ -1.12
R3HDM1-212ENST00000456040 ARAFP10398 606 aa8.05□□□□□ -1.12
R3HDM1-212ENST00000456040 EPXP11678 715 aa8.05□□□□□ -1.12
R3HDM1-212ENST00000456040 GATA4P43694 442 aa8.05□□□□□ -1.12
R3HDM1-212ENST00000456040 OSBPL3Q9H4L5 887 aa8.05□□□□□ -1.12
R3HDM1-212ENST00000456040 RUBCNLQ9H714 662 aa8.05□□□□□ -1.12
R3HDM1-212ENST00000456040 TRAK2O60296 914 aa8.04□□□□□ -1.12
R3HDM1-212ENST00000456040 FBXO45P0C2W1 286 aa8.04□□□□□ -1.12
R3HDM1-212ENST00000456040 MSX1P28360 303 aa8.04□□□□□ -1.12
R3HDM1-212ENST00000456040 RNF135Q8IUD6 432 aa8.04□□□□□ -1.12
R3HDM1-212ENST00000456040 ABHD17AQ96GS6 310 aa8.04□□□□□ -1.12
R3HDM1-212ENST00000456040 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
R3HDM1-212ENST00000456040 CHRNA4P43681 627 aa8.03□□□□□ -1.12
R3HDM1-212ENST00000456040 SCTRP47872 440 aa8.03□□□□□ -1.12
R3HDM1-212ENST00000456040 NR1H3Q13133 447 aa8.03□□□□□ -1.12
R3HDM1-212ENST00000456040 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
R3HDM1-212ENST00000456040 NEURL1BA8MQ27 555 aa8.02□□□□□ -1.13
R3HDM1-212ENST00000456040 GPR37L1O60883 481 aa8.02□□□□□ -1.13
R3HDM1-212ENST00000456040 CTBSQ01459 385 aa8.02□□□□□ -1.13
R3HDM1-212ENST00000456040 MCM6Q14566 821 aa8.02□□□□□ -1.13
R3HDM1-212ENST00000456040 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.13
R3HDM1-212ENST00000456040 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.01□□□□□ -1.13
R3HDM1-212ENST00000456040 C2CD2LO14523 706 aa8.01□□□□□ -1.13
R3HDM1-212ENST00000456040 THBS1P07996 1170 aa8.01□□□□□ -1.13
R3HDM1-212ENST00000456040 DGKGP49619 791 aa8.01□□□□□ -1.13
R3HDM1-212ENST00000456040 BNIP3LO60238 219 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 IL2RAP01589 272 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 ADH6P28332 368 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 FLIIQ13045 1269 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 C4orf17Q53FE4 359 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 TBC1D9Q6ZT07 1266 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 CHSY3Q70JA7 882 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 NBPF11Q86T75 865 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 XAGE2Q96GT9 111 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 PCDHGC4Q9Y5F7 938 aa8□□□□□ -1.13
R3HDM1-212ENST00000456040 SPATA31C1P0DKV0 1188 aa7.99□□□□□ -1.13
R3HDM1-212ENST00000456040 HOXB4P17483 251 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-212ENST00000456040 RHBDD1Q8TEB9 315 aa7.99□□□□□ -1.13
R3HDM1-212ENST00000456040 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
R3HDM1-212ENST00000456040 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
R3HDM1-212ENST00000456040 APBA3O96018 575 aa7.98□□□□□ -1.13
R3HDM1-212ENST00000456040 UBAP2LQ14157 1087 aaKnown RBP7.98□□□□□ -1.13
R3HDM1-212ENST00000456040 PRRT3Q5FWE3 981 aa7.98□□□□□ -1.13
R3HDM1-212ENST00000456040 CRISPLD1Q9H336 500 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms