RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PHKA2P46019 1235 aa6.04□□□□□ -1.44
LINC02540-201ENST00000455554 GJD4Q96KN9 370 aaPredicted RBP6.04□□□□□ -1.44
LINC02540-201ENST00000455554 CFHR5Q9BXR6 569 aa6.04□□□□□ -1.44
LINC02540-201ENST00000455554 MKL2Q9ULH7 1088 aa6.04□□□□□ -1.44
LINC02540-201ENST00000455554 TRAK2O60296 914 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 GPR37L1O60883 481 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 STAU1O95793 577 aaKnown RBP6.03□□□□□ -1.44
LINC02540-201ENST00000455554 IL2RAP01589 272 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 MCCD1P59942 119 aaPredicted RBP6.03□□□□□ -1.44
LINC02540-201ENST00000455554 TMEM259Q4ZIN3 620 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 LINC00114Q6XXX2 140 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 ALYREFQ86V81 257 aaKnown RBP6.03□□□□□ -1.44
LINC02540-201ENST00000455554 ESF1Q9H501 851 aaKnown RBP6.03□□□□□ -1.44
LINC02540-201ENST00000455554 HCN2Q9UL51 889 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 PHF24Q9UPV7 400 aa6.03□□□□□ -1.44
LINC02540-201ENST00000455554 ZNF592Q92610 1267 aa6.02□□□□□ -1.45
LINC02540-201ENST00000455554 RRAGCQ9HB90 399 aa6.02□□□□□ -1.45
LINC02540-201ENST00000455554 GDF2Q9UK05 429 aaPredicted RBP6.02□□□□□ -1.45
LINC02540-201ENST00000455554 PCDHB11Q9Y5F2 797 aa6.02□□□□□ -1.45
LINC02540-201ENST00000455554 EDARADDQ8WWZ3 215 aa6.01□□□□□ -1.45
LINC02540-201ENST00000455554 CDCA7Q9BWT1 371 aaPredicted RBP6.01□□□□□ -1.45
LINC02540-201ENST00000455554 RUBCNLQ9H714 662 aa6.01□□□□□ -1.45
LINC02540-201ENST00000455554 HRH3Q9Y5N1 445 aa6.01□□□□□ -1.45
LINC02540-201ENST00000455554 A0A1B0GTH6 734 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 GNRH1P01148 92 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 CTBSQ01459 385 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 NR1H3Q13133 447 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 GRIN2CQ14957 1233 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 GOLGA6L1Q8N7Z2 621 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 CNKSR1Q969H4 720 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 PSMG3-AS1Q96PY0 264 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 ESYT1Q9BSJ8 1104 aa6□□□□□ -1.45
LINC02540-201ENST00000455554 C1QTNF9BB2RNN3 333 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 CHRNA4P43681 627 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 CENPCQ03188 943 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 LBRQ14739 615 aaKnown RBP5.99□□□□□ -1.45
LINC02540-201ENST00000455554 CD163Q86VB7 1156 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 ABHD17AQ96GS6 310 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 PCMTD1Q96MG8 357 aaPredicted RBP5.99□□□□□ -1.45
LINC02540-201ENST00000455554 FHDC1Q9C0D6 1143 aaPredicted RBP5.99□□□□□ -1.45
LINC02540-201ENST00000455554 GOPCQ9HD26 462 aa5.99□□□□□ -1.45
LINC02540-201ENST00000455554 ZNF330Q9Y3S2 320 aaPredicted RBP5.99□□□□□ -1.45
LINC02540-201ENST00000455554 CSB-PGBD3P0DP91 1061 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 AMPD1P23109 780 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 GTF2E1P29083 439 aaPredicted RBP5.98□□□□□ -1.45
LINC02540-201ENST00000455554 TSGA10IPQ3SY00 556 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 C4orf17Q53FE4 359 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 GNASQ5JWF2 1037 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 PGBD3Q8N328 593 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 ZSCAN10Q96SZ4 725 aaPredicted RBP5.98□□□□□ -1.45
LINC02540-201ENST00000455554 NDFIP2Q9NV92 336 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 GGA1Q9UJY5 639 aa5.98□□□□□ -1.45
LINC02540-201ENST00000455554 BNIP3LO60238 219 aa5.97□□□□□ -1.45
LINC02540-201ENST00000455554 BMP4P12644 408 aa5.97□□□□□ -1.45
LINC02540-201ENST00000455554 SLCO4C1Q6ZQN7 724 aa5.97□□□□□ -1.45
LINC02540-201ENST00000455554 CCDC85AQ96PX6 553 aaPredicted RBP5.97□□□□□ -1.45
LINC02540-201ENST00000455554 ATXN7L1Q9ULK2 861 aaPredicted RBP5.97□□□□□ -1.45
LINC02540-201ENST00000455554 PIK3R2O00459 728 aa5.96□□□□□ -1.46
LINC02540-201ENST00000455554 MYCP01106 439 aaPredicted RBP5.96□□□□□ -1.46
LINC02540-201ENST00000455554 MSX1P28360 303 aa5.96□□□□□ -1.46
LINC02540-201ENST00000455554 EFHC2Q5JST6 749 aa5.96□□□□□ -1.46
LINC02540-201ENST00000455554 TMEM214Q6NUQ4 689 aaKnown RBP5.96□□□□□ -1.46
LINC02540-201ENST00000455554 GNB5O14775 395 aa5.95□□□□□ -1.46
LINC02540-201ENST00000455554 FGFR3P22607 806 aa5.95□□□□□ -1.46
LINC02540-201ENST00000455554 XAGE2Q96GT9 111 aa5.95□□□□□ -1.46
LINC02540-201ENST00000455554 BTBD6Q96KE9 485 aa5.95□□□□□ -1.46
LINC02540-201ENST00000455554 KLF15Q9UIH9 416 aa5.95□□□□□ -1.46
LINC02540-201ENST00000455554 DGKGP49619 791 aa5.94□□□□□ -1.46
LINC02540-201ENST00000455554 DOC2BQ14184 412 aa5.94□□□□□ -1.46
LINC02540-201ENST00000455554 FOXD4L6Q3SYB3 417 aaPredicted RBP5.94□□□□□ -1.46
LINC02540-201ENST00000455554 ESCO1Q5FWF5 840 aa5.94□□□□□ -1.46
LINC02540-201ENST00000455554 FOXD4L3Q6VB84 417 aaPredicted RBP5.94□□□□□ -1.46
LINC02540-201ENST00000455554 DNAAF2Q9NVR5 837 aaKnown RBP5.94□□□□□ -1.46
LINC02540-201ENST00000455554 EPXP11678 715 aa5.93□□□□□ -1.46
LINC02540-201ENST00000455554 CRISPLD1Q9H336 500 aa5.93□□□□□ -1.46
LINC02540-201ENST00000455554 NOP53Q9NZM5 478 aaKnown RBP5.93□□□□□ -1.46
LINC02540-201ENST00000455554 NEURL1BA8MQ27 555 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 ARAFP10398 606 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 RNF135Q8IUD6 432 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 RHBDD1Q8TEB9 315 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 SEMA6BQ9H3T3 888 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 ETNK1Q9HBU6 452 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 CEP126Q9P2H0 1117 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 NDUFB9Q9Y6M9 179 aa5.92□□□□□ -1.46
LINC02540-201ENST00000455554 SOCS7O14512 581 aa5.91□□□□□ -1.46
LINC02540-201ENST00000455554 FIGNL1Q6PIW4 674 aa5.91□□□□□ -1.46
LINC02540-201ENST00000455554 FCHSD1Q86WN1 690 aa5.91□□□□□ -1.46
LINC02540-201ENST00000455554 PPARGC1BQ86YN6 1023 aaKnown RBP5.91□□□□□ -1.46
LINC02540-201ENST00000455554 KRTAP1-3Q8IUG1 177 aa5.91□□□□□ -1.46
LINC02540-201ENST00000455554 TRIM11Q96F44 468 aa5.91□□□□□ -1.46
LINC02540-201ENST00000455554 ATP4AP20648 1035 aa5.9□□□□□ -1.46
LINC02540-201ENST00000455554 TLR1Q15399 786 aa5.9□□□□□ -1.46
LINC02540-201ENST00000455554 TBC1D9Q6ZT07 1266 aa5.9□□□□□ -1.46
LINC02540-201ENST00000455554 MTMR14Q8NCE2 650 aa5.9□□□□□ -1.46
LINC02540-201ENST00000455554 BANK1Q8NDB2 785 aa5.9□□□□□ -1.46
LINC02540-201ENST00000455554 APBB1O00213 710 aa5.89□□□□□ -1.47
LINC02540-201ENST00000455554 PLA2G4AP47712 749 aa5.89□□□□□ -1.47
LINC02540-201ENST00000455554 CHSY3Q70JA7 882 aa5.89□□□□□ -1.47
LINC02540-201ENST00000455554 ZCCHC2Q9C0B9 1178 aaKnown RBP5.89□□□□□ -1.47
LINC02540-201ENST00000455554 PCDHGC4Q9Y5F7 938 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms