RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 GPAMQ9HCL2 828 aa8.66□□□□□ -1.02
LINC01004-201ENST00000445184 BMP4P12644 408 aa8.65□□□□□ -1.02
LINC01004-201ENST00000445184 ERVK-9P63128 1117 aa8.65□□□□□ -1.02
LINC01004-201ENST00000445184 CYP2U1Q7Z449 544 aa8.65□□□□□ -1.02
LINC01004-201ENST00000445184 EPS8L1Q8TE68 723 aa8.65□□□□□ -1.02
LINC01004-201ENST00000445184 GGA1Q9UJY5 639 aa8.65□□□□□ -1.02
LINC01004-201ENST00000445184 LBRQ14739 615 aaKnown RBP8.64□□□□□ -1.03
LINC01004-201ENST00000445184 ATXN7L1Q9ULK2 861 aaPredicted RBP8.64□□□□□ -1.03
LINC01004-201ENST00000445184 GIGYF1O75420 1035 aaPredicted RBP8.63□□□□□ -1.03
LINC01004-201ENST00000445184 GATA4P43694 442 aa8.63□□□□□ -1.03
LINC01004-201ENST00000445184 DGKGP49619 791 aa8.63□□□□□ -1.03
LINC01004-201ENST00000445184 C2CD2LO14523 706 aa8.62□□□□□ -1.03
LINC01004-201ENST00000445184 AP1G2O75843 785 aa8.62□□□□□ -1.03
LINC01004-201ENST00000445184 EPXP11678 715 aa8.62□□□□□ -1.03
LINC01004-201ENST00000445184 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
LINC01004-201ENST00000445184 A0A1B0GTH6 734 aa8.61□□□□□ -1.03
LINC01004-201ENST00000445184 BTBD11A6QL63 1104 aa8.61□□□□□ -1.03
LINC01004-201ENST00000445184 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
LINC01004-201ENST00000445184 PGBD3Q8N328 593 aa8.61□□□□□ -1.03
LINC01004-201ENST00000445184 RNF20Q5VTR2 975 aa8.6□□□□□ -1.03
LINC01004-201ENST00000445184 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
LINC01004-201ENST00000445184 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
LINC01004-201ENST00000445184 PCDHB9Q9Y5E1 797 aa8.6□□□□□ -1.03
LINC01004-201ENST00000445184 FGFR3P22607 806 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 PHKA2P46019 1235 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 ABHD17AQ96GS6 310 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 ZFP64Q9NPA5 681 aa8.59□□□□□ -1.03
LINC01004-201ENST00000445184 ARAFP10398 606 aa8.58□□□□□ -1.04
LINC01004-201ENST00000445184 CTBSQ01459 385 aa8.58□□□□□ -1.04
LINC01004-201ENST00000445184 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
LINC01004-201ENST00000445184 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
LINC01004-201ENST00000445184 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
LINC01004-201ENST00000445184 RSPO4Q2I0M5 234 aaPredicted RBP8.57□□□□□ -1.04
LINC01004-201ENST00000445184 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
LINC01004-201ENST00000445184 ARTNQ5T4W7 220 aa8.57□□□□□ -1.04
LINC01004-201ENST00000445184 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
LINC01004-201ENST00000445184 RUBCNLQ9H714 662 aa8.57□□□□□ -1.04
LINC01004-201ENST00000445184 ATP1B4Q9UN42 357 aaPredicted RBP8.57□□□□□ -1.04
LINC01004-201ENST00000445184 NEURL1BA8MQ27 555 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 BNIP3LO60238 219 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 TRAK2O60296 914 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 SCTRP47872 440 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 CENPCQ03188 943 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 ESYT1Q9BSJ8 1104 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC01004-201ENST00000445184 OSBPL3Q9H4L5 887 aa8.56□□□□□ -1.04
LINC01004-201ENST00000445184 ZBBXA8MT70 800 aa8.55□□□□□ -1.04
LINC01004-201ENST00000445184 USP17L8P0C7I0 530 aa8.55□□□□□ -1.04
LINC01004-201ENST00000445184 GTF2E1P29083 439 aaPredicted RBP8.55□□□□□ -1.04
LINC01004-201ENST00000445184 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
LINC01004-201ENST00000445184 PROCA1Q8NCQ7 364 aaPredicted RBP8.55□□□□□ -1.04
LINC01004-201ENST00000445184 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
LINC01004-201ENST00000445184 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
LINC01004-201ENST00000445184 GNRH1P01148 92 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 SPATA31C1P0DKV0 1188 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 KRTAP9-9Q9BYP9 154 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 KRTAP9-4Q9BYQ2 154 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
LINC01004-201ENST00000445184 MSX1P28360 303 aa8.53□□□□□ -1.04
LINC01004-201ENST00000445184 IL2RAP01589 272 aa8.52□□□□□ -1.05
LINC01004-201ENST00000445184 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
LINC01004-201ENST00000445184 TMEM214Q6NUQ4 689 aaKnown RBP8.52□□□□□ -1.05
LINC01004-201ENST00000445184 PCDHB11Q9Y5F2 797 aa8.52□□□□□ -1.05
LINC01004-201ENST00000445184 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
LINC01004-201ENST00000445184 PLVAPQ9BX97 442 aa8.51□□□□□ -1.05
LINC01004-201ENST00000445184 DYRK3O43781 588 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 ADH6P28332 368 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 MCCD1P59942 119 aaPredicted RBP8.5□□□□□ -1.05
LINC01004-201ENST00000445184 C4orf17Q53FE4 359 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 FIGNL1Q6PIW4 674 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
LINC01004-201ENST00000445184 FBXO45P0C2W1 286 aa8.49□□□□□ -1.05
LINC01004-201ENST00000445184 HRH3Q9Y5N1 445 aa8.49□□□□□ -1.05
LINC01004-201ENST00000445184 ZNF592Q92610 1267 aa8.48□□□□□ -1.05
LINC01004-201ENST00000445184 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
LINC01004-201ENST00000445184 FHDC1Q9C0D6 1143 aaPredicted RBP8.48□□□□□ -1.05
LINC01004-201ENST00000445184 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
LINC01004-201ENST00000445184 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
LINC01004-201ENST00000445184 TRIM34Q9BYJ4 488 aa8.47□□□□□ -1.05
LINC01004-201ENST00000445184 GOLGA2P5Q9HBQ8 144 aa8.47□□□□□ -1.05
LINC01004-201ENST00000445184 AVENQ9NQS1 362 aaPredicted RBP8.47□□□□□ -1.05
LINC01004-201ENST00000445184 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.06
LINC01004-201ENST00000445184 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
LINC01004-201ENST00000445184 APBA3O96018 575 aa8.46□□□□□ -1.06
LINC01004-201ENST00000445184 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
LINC01004-201ENST00000445184 ZCCHC2Q9C0B9 1178 aaKnown RBP8.46□□□□□ -1.06
LINC01004-201ENST00000445184 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
LINC01004-201ENST00000445184 PRRT3Q5FWE3 981 aa8.45□□□□□ -1.06
LINC01004-201ENST00000445184 PRSS36Q5K4E3 855 aa8.45□□□□□ -1.06
LINC01004-201ENST00000445184 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
LINC01004-201ENST00000445184 SLC24A3Q9HC58 644 aa8.45□□□□□ -1.06
LINC01004-201ENST00000445184 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
LINC01004-201ENST00000445184 FAM182BQ5T319 152 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms