RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 RHOQP17081 205 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 ITGA6P23229 1130 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 SMTNP53814 917 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 USP17L2Q6R6M4 530 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 TAS1R3Q7RTX0 852 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 USP17L1Q7RTZ2 530 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
HMGB3P23-201ENST00000414981 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
HMGB3P23-201ENST00000414981 BACH1O14867 736 aa7.55□□□□□ -1.2
HMGB3P23-201ENST00000414981 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
HMGB3P23-201ENST00000414981 TMEM214Q6NUQ4 689 aaKnown RBP7.55□□□□□ -1.2
HMGB3P23-201ENST00000414981 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
HMGB3P23-201ENST00000414981 CDK2AP1O14519 115 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 GMPRP36959 345 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 MTFR1Q15390 333 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 TLR1Q15399 786 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 GNASQ5JWF2 1037 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 LARGE2Q8N3Y3 721 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 TIMMDC1Q9NPL8 285 aa7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 MAFBQ9Y5Q3 323 aaPredicted RBP7.54□□□□□ -1.2
HMGB3P23-201ENST00000414981 A6NJY4 79 aa7.53□□□□□ -1.2
HMGB3P23-201ENST00000414981 F11P03951 625 aa7.53□□□□□ -1.2
HMGB3P23-201ENST00000414981 SV2AQ7L0J3 742 aa7.53□□□□□ -1.2
HMGB3P23-201ENST00000414981 RHBDD1Q8TEB9 315 aa7.53□□□□□ -1.2
HMGB3P23-201ENST00000414981 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
HMGB3P23-201ENST00000414981 H7C1W4 665 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 CLDN10P78369 228 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 PSME1Q06323 249 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 CCDC102BQ68D86 513 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 TRIM22Q8IYM9 498 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 VWA5B2Q8N398 1253 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 OGFOD1Q8N543 542 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 SERTAD1Q9UHV2 236 aa7.52□□□□□ -1.21
HMGB3P23-201ENST00000414981 A0A1B0GTH6 734 aa7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 INSM1Q01101 510 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 C4orf17Q53FE4 359 aa7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 KANK4Q5T7N3 995 aaPredicted RBP7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 NIFKQ9BYG3 293 aaKnown RBP7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 ZNF358Q9NW07 568 aa7.51□□□□□ -1.21
HMGB3P23-201ENST00000414981 M0R2N6 131 aa7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 PHKA2P46019 1235 aa7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 DBN1Q16643 649 aa7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 SIX5Q8N196 739 aa7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 GAS2L1Q99501 681 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 VRTNQ9H8Y1 702 aa7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 CUEDC1Q9NWM3 386 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
HMGB3P23-201ENST00000414981 DKK1O94907 266 aa7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 RASA1P20936 1047 aa7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 RIPOR1Q6ZS17 1223 aa7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 KIAA1024Q9UPX6 916 aa7.49□□□□□ -1.21
HMGB3P23-201ENST00000414981 CDC14CA4D256 554 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 CFAP70Q5T0N1 1121 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 FOXR1Q6PIV2 292 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 TPCN2Q8NHX9 752 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 RBM19Q9Y4C8 960 aaKnown RBP7.48□□□□□ -1.21
HMGB3P23-201ENST00000414981 MSX1P28360 303 aa7.47□□□□□ -1.21
HMGB3P23-201ENST00000414981 EPHA4P54764 986 aa7.47□□□□□ -1.21
HMGB3P23-201ENST00000414981 FOXK2Q01167 660 aa7.47□□□□□ -1.21
HMGB3P23-201ENST00000414981 LBRQ14739 615 aaKnown RBP7.47□□□□□ -1.21
HMGB3P23-201ENST00000414981 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
HMGB3P23-201ENST00000414981 PTK7Q13308 1070 aa7.46□□□□□ -1.22
HMGB3P23-201ENST00000414981 ERICH6Q7L0X2 663 aa7.46□□□□□ -1.22
HMGB3P23-201ENST00000414981 ZNF837Q96EG3 531 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P23-201ENST00000414981 COL25A1Q9BXS0 654 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P23-201ENST00000414981 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 SEC13P55735 322 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 TEAD4Q15561 434 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 TNS4Q8IZW8 715 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 PGBD3Q8N328 593 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 NUCKS1Q9H1E3 243 aaKnown RBP7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 CABP1Q9NZU7 370 aa7.45□□□□□ -1.22
HMGB3P23-201ENST00000414981 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 ZNF594Q96JF6 807 aaPredicted RBP7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 ZDHHC3Q9NYG2 299 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 SERPINA10Q9UK55 444 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 USP3Q9Y6I4 520 aa7.44□□□□□ -1.22
HMGB3P23-201ENST00000414981 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 NOS2P35228 1153 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 KRT76Q01546 638 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 ANKMY2Q8IV38 441 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 GTPBP3Q969Y2 492 aaKnown RBP7.43□□□□□ -1.22
HMGB3P23-201ENST00000414981 CNTNAP3BQ96NU0 1288 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms