RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 FKBP4Q02790 459 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 SCG3Q8WXD2 468 aaKnown RBP8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 IGSF5Q9NSI5 407 aa8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
HMGB1P10-201ENST00000395823 FOXO3O43524 673 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 ADH1CP00326 375 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 FOXK2Q01167 660 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
HMGB1P10-201ENST00000395823 DHX9Q08211 1270 aaKnown RBP8.36□□□□□ -1.07
HMGB1P10-201ENST00000395823 SAP130Q9H0E3 1048 aa8.36□□□□□ -1.07
HMGB1P10-201ENST00000395823 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 BACH1O14867 736 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 NPR3P17342 541 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 CCDC116Q8IYX3 515 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 ESF1Q9H501 851 aaKnown RBP8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
HMGB1P10-201ENST00000395823 GNRH1P01148 92 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 MAPK1P28482 360 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 MYT1Q01538 1121 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 TBCELQ5QJ74 424 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 CYP2U1Q7Z449 544 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 ASB16Q96NS5 453 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 RAB6BQ9NRW1 208 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
HMGB1P10-201ENST00000395823 WNT7AO00755 349 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 IL2RAP01589 272 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 NR5A1Q13285 461 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MTFR1Q15390 333 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 SLC9A9Q8IVB4 645 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 KDF1Q8NAX2 398 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
HMGB1P10-201ENST00000395823 A6NJY4 79 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 ARHGEF10LQ9HCE6 1279 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 HRH3Q9Y5N1 445 aa8.32□□□□□ -1.08
HMGB1P10-201ENST00000395823 TNFRSF10BO14763 440 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 IGSF3O75054 1194 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 MPSTP25325 297 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 SMTNP53814 917 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 XAGE2Q96GT9 111 aa8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 C2orf49Q9BVC5 232 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P10-201ENST00000395823 COX20Q5RI15 118 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 ZNF295-AS1Q8N0V1 137 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 STAG2Q8N3U4 1231 aa8.3□□□□□ -1.08
HMGB1P10-201ENST00000395823 FAM13AO94988 1023 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 RGL4Q8IZJ4 473 aa8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
HMGB1P10-201ENST00000395823 ADH1AP07327 375 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 SLC19A1P41440 591 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 EMILIN1Q9Y6C2 1016 aa8.28□□□□□ -1.08
HMGB1P10-201ENST00000395823 PSMA6P60900 246 aaKnown RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 CBLBQ13191 982 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 SH3PXD2AQ5TCZ1 1133 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 TMC7Q7Z402 723 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 SPNS2Q8IVW8 549 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 ZDHHC1Q8WTX9 485 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 CNKSR1Q969H4 720 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 FHDC1Q9C0D6 1143 aaPredicted RBP8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
HMGB1P10-201ENST00000395823 EML1O00423 815 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 FZD6O60353 706 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 IGHA2P01877 340 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 P4HBP07237 508 aaKnown RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 EIF1AXP47813 144 aaKnown RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 CLN3Q13286 438 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 NNTQ13423 1086 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 COL19A1Q14993 1142 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 TLR1Q15399 786 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 ESYT1Q9BSJ8 1104 aa8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 KLF16Q9BXK1 252 aaPredicted RBP8.26□□□□□ -1.09
HMGB1P10-201ENST00000395823 SPRYD7Q5W111 196 aa8.25□□□□□ -1.09
HMGB1P10-201ENST00000395823 MYO19Q96H55 970 aa8.25□□□□□ -1.09
HMGB1P10-201ENST00000395823 CCDC87Q9NVE4 849 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms