RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 A0A1B0GUL7 405 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 EBAG9O00559 213 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 PCK1P35558 622 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC96Q2M329 555 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC170Q8IYT3 715 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.27□□□□□ -0.93
TRPS1-203ENST00000395715 FKBP15Q5T1M5 1219 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 TRIM22Q8IYM9 498 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 TMX1Q9H3N1 280 aa9.27□□□□□ -0.93
TRPS1-203ENST00000395715 EIF2S2P20042 333 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 MRPS9P82933 396 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 SLU7O95391 586 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 CAPN2P17655 700 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 MORC4Q8TE76 937 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 PPP1R12CQ9BZL4 782 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 KIF15Q9NS87 1388 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 CLNS1AP54105 237 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 XPCQ01831 940 aaPredicted RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 MAP3K11Q16584 847 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 LRCH2Q5VUJ6 765 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 WDR63Q8IWG1 891 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 HIP1O00291 1037 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 TTC14Q96N46 770 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 ZBED9Q6R2W3 1325 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 NUP88Q99567 741 aaPredicted RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 FERMT1Q9BQL6 677 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 WASHC2CQ9Y4E1 1318 aa9.26□□□□□ -0.93
TRPS1-203ENST00000395715 TOP1P11387 765 aaKnown RBP9.26□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC57Q2TAC2 916 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
TRPS1-203ENST00000395715 PAXBP1Q9Y5B6 917 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 SYCE3A1L190 88 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 GMNNO75496 209 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 KIF5AQ12840 1032 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 PRC1O43663 620 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 MIER3Q7Z3K6 550 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 STMN4Q9H169 189 aaPredicted RBP9.25□□□□□ -0.93
TRPS1-203ENST00000395715 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 ODF2LQ9ULJ1 636 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 PSME1Q06323 249 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 ARFGAP3Q9NP61 516 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 BUB1BO60566 1050 aaPredicted RBP9.25□□□□□ -0.93
TRPS1-203ENST00000395715 PRPF4BQ13523 1007 aaKnown RBP9.25□□□□□ -0.93
TRPS1-203ENST00000395715 MAP7Q14244 749 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 FSD1Q9BTV5 496 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 GBP1P32455 592 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 JADE2Q9NQC1 790 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 TRMT1Q9NXH9 659 aaKnown RBP9.25□□□□□ -0.93
TRPS1-203ENST00000395715 USH1CQ9Y6N9 552 aa9.25□□□□□ -0.93
TRPS1-203ENST00000395715 WHAMMP3Q1A5X7 153 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 MYBBP1AQ9BQG0 1328 aaKnown RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 CEP162Q5TB80 1403 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 NDC80O14777 642 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 TEFQ10587 303 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 PKD2Q13563 968 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 STK3Q13188 491 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 MVPQ14764 893 aaKnown RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 LRRC43Q8N309 656 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 SPTY2D1Q68D10 685 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 RUFY3Q7L099 469 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 HMGB1P1B2RPK0 211 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 DACT3Q96B18 629 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 NUF2Q9BZD4 464 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 DBN1Q16643 649 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC150Q8NCX0 1101 aa9.24□□□□□ -0.93
TRPS1-203ENST00000395715 API5Q9BZZ5 524 aaKnown RBP9.24□□□□□ -0.93
TRPS1-203ENST00000395715 AP1ARQ63HQ0 302 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 VCXQ9H320 206 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 ZNF365Q70YC5 407 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC69A6NI79 296 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 OPA1O60313 960 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-203ENST00000395715 BANK1Q8NDB2 785 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 NAA16Q6N069 864 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-203ENST00000395715 TTC16Q8NEE8 873 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 CCDC63Q8NA47 563 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 CIB2O75838 187 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
TRPS1-203ENST00000395715 CAMK4Q16566 473 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 CYP46A1Q9Y6A2 500 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-203ENST00000395715 KIAA0753Q2KHM9 967 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
TRPS1-203ENST00000395715 FMNL3Q8IVF7 1028 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
TRPS1-203ENST00000395715 TDRD12Q587J7 1177 aaKnown RBP9.22□□□□□ -0.93
TRPS1-203ENST00000395715 CPLX4Q7Z7G2 160 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 ACTN2P35609 894 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 MCM6Q14566 821 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 TSG101Q99816 390 aa9.22□□□□□ -0.93
TRPS1-203ENST00000395715 NEMFO60524 1076 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms