RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 USP48Q86UV5 1035 aa3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 TSEN2Q8NCE0 465 aaKnown RBP3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 CCDC136Q96JN2 1154 aa3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 DCBLD2Q96PD2 775 aa3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 CCDC85AQ96PX6 553 aaPredicted RBP3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 PIF1Q9H611 641 aa3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 SEPT9Q9UHD8 586 aaPredicted RBP3.47□□□□□ -1.85
RNU6-220P-201ENST00000390919 PPP1R12AO14974 1030 aaPredicted RBP3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 TPD52L2O43399 206 aaKnown RBP3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 CCNYL3P0C7X3 344 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 IGFBP4P22692 258 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 GNA15P30679 374 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 TCEAL1Q15170 157 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 FAM98CQ17RN3 349 aaKnown RBP3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 TSGA10IPQ3SY00 556 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 ZNF746Q6NUN9 644 aaPredicted RBP3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 C16orf46Q6P387 395 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 CAPN12Q6ZSI9 719 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 HS2ST1Q7LGA3 356 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 SAMD7Q7Z3H4 446 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 FILIP1Q7Z7B0 1213 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 CRELD1Q96HD1 420 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 GPATCH3Q96I76 525 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 CARD14Q9BXL6 1004 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 BRINP2Q9C0B6 783 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 SLKQ9H2G2 1235 aaPredicted RBP3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 KLHL42Q9P2K6 505 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 RIPOR2Q9Y4F9 1068 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCDHB11Q9Y5F2 797 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCDHGA11Q9Y5H2 935 aa3.46□□□□□ -1.86
RNU6-220P-201ENST00000390919 MAGEB6P1A0A0J9YX57 407 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 PNMA6FA0A0J9YX94 578 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 U2SURPO15042 1029 aaKnown RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 ACTN4O43707 911 aaKnown RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 EIF1AXP47813 144 aaKnown RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 DSC3Q14574 896 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 TAF7LQ5H9L4 462 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 RNF19BQ6ZMZ0 732 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 NLGN1Q8N2Q7 840 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 ABTB2Q8N961 1025 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 MORC4Q8TE76 937 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 CHMP7Q8WUX9 453 aaPredicted RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 ALKBH8Q96BT7 664 aaKnown RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 SLC10A4Q96EP9 437 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 FRMD6Q96NE9 622 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 NUDT12Q9BQG2 462 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 MAGEC2Q9UBF1 373 aaPredicted RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 RABGEF1Q9UJ41 708 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 DDX41Q9UJV9 622 aaKnown RBP3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 WWC3Q9ULE0 1092 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 SPG7Q9UQ90 795 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 COL4A3BPQ9Y5P4 624 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 EMILIN1Q9Y6C2 1016 aa3.45□□□□□ -1.86
RNU6-220P-201ENST00000390919 LOC102724159A0A0B4J2E5 919 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 K7ELQ4 463 aaPredicted RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 HAX1O00165 279 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 BACH1O14867 736 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 DNAJC6O75061 913 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 GIGYF1O75420 1035 aaPredicted RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 NR1I2O75469 434 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SSBP05455 408 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 XRCC5P13010 732 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 EIF4BP23588 611 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 USP5P45974 858 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 AGERQ15109 404 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 PWP2Q15269 919 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 ENOX2Q16206 610 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 ZNF394Q53GI3 561 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 NBPF6Q5VWK0 638 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 BLOC1S3Q6QNY0 202 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 JAZF1Q86VZ6 243 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 MCF2L2Q86YR7 1114 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 EXOC8Q8IYI6 725 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 TTC16Q8NEE8 873 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 FBF1Q8TES7 1133 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SCG3Q8WXD2 468 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 NBPF4Q96M43 638 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 PURBQ96QR8 312 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 FAM129BQ96TA1 746 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 ZBED2Q9BTP6 218 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 NIF3L1Q9GZT8 377 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SPC25Q9HBM1 224 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 STIM2Q9P246 746 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 DMGDHQ9UI17 866 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 GGT7Q9UJ14 662 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 METRNQ9UJH8 293 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SUGT1Q9Y2Z0 365 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 SALL2Q9Y467 1007 aaPredicted RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCDHGB7Q9Y5F8 929 aa3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 MRPL42Q9Y6G3 142 aaKnown RBP3.44□□□□□ -1.86
RNU6-220P-201ENST00000390919 HMGB1P1B2RPK0 211 aaPredicted RBP3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 GPR182O15218 404 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 ZBTB24O43167 697 aaPredicted RBP3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 S100BP04271 92 aaPredicted RBP3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 NEFLP07196 543 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCSK2P16519 638 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 GPR153Q6NV75 609 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms