RNA–Protein interactions for RNA: ENST00000384205.1

RNU6-4P-201, Transcript of RNA, U6 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6-4P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-4P-201ENST00000384205 GSK3AP49840 483 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 GDF10P55107 478 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 SEC13P55735 322 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 CLDN10P78369 228 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 RELBQ01201 579 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 USP17L24Q0WX57 530 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 ANKMY2Q8IV38 441 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 KDF1Q8NAX2 398 aaPredicted RBP5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 FAM200AQ8TCP9 573 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 KIFC2Q96AC6 838 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 ESYT1Q9BSJ8 1104 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 SENP2Q9HC62 589 aa5.31□□□□□ -1.56
RNU6-4P-201ENST00000384205 CSB-PGBD3P0DP91 1061 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 GTF2E1P29083 439 aaPredicted RBP5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 CRTC2Q53ET0 693 aaPredicted RBP5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 CDCA8Q53HL2 280 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 TPCN2Q8NHX9 752 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 CNKSR1Q969H4 720 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 ZNF594Q96JF6 807 aaPredicted RBP5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 AGBL1Q96MI9 1066 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 SLC4A9Q96Q91 983 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 KRTAP9-2Q9BYQ4 174 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 ARHGEF10LQ9HCE6 1279 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 ATP13A2Q9NQ11 1180 aa5.3□□□□□ -1.56
RNU6-4P-201ENST00000384205 TMEM229AB2RXF0 380 aa5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 MEN1O00255 615 aa5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 RNF144AP50876 292 aaPredicted RBP5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 SCNN1DP51172 638 aa5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 DPYDQ12882 1025 aa5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 ZNF395Q9H8N7 513 aaPredicted RBP5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 ETNK1Q9HBU6 452 aa5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 NOVA2Q9UNW9 492 aaKnown RBP5.29□□□□□ -1.56
RNU6-4P-201ENST00000384205 SMTNP53814 917 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 C6orf118Q5T5N4 469 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 TRIM46Q7Z4K8 759 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 NBPF15Q8N660 670 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 TRIM47Q96LD4 638 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 ZFP42Q96MM3 310 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 PURBQ96QR8 312 aaKnown RBP5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 POLMQ9NP87 494 aaPredicted RBP5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 ZNF358Q9NW07 568 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 KIAA1024Q9UPX6 916 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 USTQ9Y2C2 406 aa5.28□□□□□ -1.56
RNU6-4P-201ENST00000384205 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 A6NJY4 79 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 TTLL8A6PVC2 850 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 CDK2AP1O14519 115 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 DKK1O94907 266 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 IL2RAP01589 272 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 BMP1P13497 986 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 CENPCQ03188 943 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 KCNMA1Q12791 1236 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 MTFR1Q15390 333 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 WDR44Q5JSH3 913 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 SLC27A3Q5K4L6 730 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 ARXQ96QS3 562 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 ZSCAN10Q96SZ4 725 aaPredicted RBP5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 INSM2Q96T92 566 aaPredicted RBP5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 RAB6BQ9NRW1 208 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 HRH3Q9Y5N1 445 aa5.27□□□□□ -1.57
RNU6-4P-201ENST00000384205 SOS2Q07890 1332 aaPredicted RBP5.26□□□□□ -1.57
RNU6-4P-201ENST00000384205 TLR1Q15399 786 aa5.26□□□□□ -1.57
RNU6-4P-201ENST00000384205 GRIP2Q9C0E4 1043 aa5.26□□□□□ -1.57
RNU6-4P-201ENST00000384205 SERTAD1Q9UHV2 236 aa5.26□□□□□ -1.57
RNU6-4P-201ENST00000384205 SFI1A8K8P3 1242 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 SPATA31C2B4DYI2 1134 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 MAN1A2O60476 641 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 CTSOP43234 321 aaPredicted RBP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 GNASQ5JWF2 1037 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 TMEM214Q6NUQ4 689 aaKnown RBP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 LYSMD3Q7Z3D4 306 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 PPARGC1BQ86YN6 1023 aaKnown RBP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 HINFPQ9BQA5 517 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 FHDC1Q9C0D6 1143 aaPredicted RBP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 SCHIP1Q9P0W5 487 aaPredicted RBP5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 ZMIZ1Q9ULJ6 1067 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 CHMP3Q9Y3E7 222 aa5.25□□□□□ -1.57
RNU6-4P-201ENST00000384205 TMEM164Q5U3C3 297 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 FOXD4L5Q5VV16 416 aaPredicted RBP5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 B4GALNT3Q6L9W6 998 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 KRTAP1-3Q8IUG1 177 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 TSEN2Q8NCE0 465 aaKnown RBP5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 RNF217Q8TC41 542 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 RHBDD1Q8TEB9 315 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 SLC16A10Q8TF71 515 aa5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU6-4P-201ENST00000384205 STAU1O95793 577 aaKnown RBP5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 IGFBP4P22692 258 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 EPHA4P54764 986 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 FOXK2Q01167 660 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 TAS1R3Q7RTX0 852 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 TNS4Q8IZW8 715 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 STAG2Q8N3U4 1231 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 STK32AQ8WU08 396 aa5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 CLP1Q92989 425 aaKnown RBP5.23□□□□□ -1.57
RNU6-4P-201ENST00000384205 NIFKQ9BYG3 293 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms