RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 BOLA2Q9H3K6 86 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 ZNHIT6Q9NWK9 470 aaKnown RBP16.06■□□□□ 0.16
GPC6-201ENST00000377047 KRT85P78386 507 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 TNMDQ9H2S6 317 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
GPC6-201ENST00000377047 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 TEX35Q5T0J7 233 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 ACBD3Q9H3P7 528 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 ZBTB3Q9H5J0 574 aa16.06■□□□□ 0.16
GPC6-201ENST00000377047 ANKRD18BA2A2Z9 1011 aa16.05■□□□□ 0.16
GPC6-201ENST00000377047 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
GPC6-201ENST00000377047 WASF1Q92558 559 aa16.05■□□□□ 0.16
GPC6-201ENST00000377047 F6X3S4 739 aa16.05■□□□□ 0.16
GPC6-201ENST00000377047 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
GPC6-201ENST00000377047 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
GPC6-201ENST00000377047 HYPKQ9NX55 129 aa16.05■□□□□ 0.16
GPC6-201ENST00000377047 SEC63Q9UGP8 760 aaKnown RBP16.05■□□□□ 0.16
GPC6-201ENST00000377047 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.05■□□□□ 0.16
GPC6-201ENST00000377047 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
GPC6-201ENST00000377047 MYO6Q9UM54 1294 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
GPC6-201ENST00000377047 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 MX1P20591 662 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 DEF6Q9H4E7 631 aa16.04■□□□□ 0.16
GPC6-201ENST00000377047 NAPBQ9H115 298 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 MRE11P49959 708 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 IFNL2Q8IZJ0 200 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 TNRQ92752 1358 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 SKIDA1Q1XH10 827 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 SPC24Q8NBT2 197 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
GPC6-201ENST00000377047 A0A087WZG4 1122 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 MSH6P52701 1360 aa16.03■□□□□ 0.16
GPC6-201ENST00000377047 FAM43AQ8N2R8 423 aa16.02■□□□□ 0.16
GPC6-201ENST00000377047 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
GPC6-201ENST00000377047 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
GPC6-201ENST00000377047 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.16
GPC6-201ENST00000377047 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
GPC6-201ENST00000377047 WDHD1O75717 1129 aaPredicted RBP16.02■□□□□ 0.16
GPC6-201ENST00000377047 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
GPC6-201ENST00000377047 ACEP12821 1306 aa16.02■□□□□ 0.15
GPC6-201ENST00000377047 CCDC192P0DO97 292 aa16.02■□□□□ 0.15
GPC6-201ENST00000377047 HSP90B2PQ58FF3 399 aa16.02■□□□□ 0.15
GPC6-201ENST00000377047 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 CCDC96Q2M329 555 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
GPC6-201ENST00000377047 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
GPC6-201ENST00000377047 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 TTC21BQ7Z4L5 1316 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 RFC4P35249 363 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 ALDH1L2Q3SY69 923 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 ZNF444Q8N0Y2 327 aaPredicted RBP16.01■□□□□ 0.15
GPC6-201ENST00000377047 UBAP1LF5GYI3 381 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 WDR78Q5VTH9 848 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
GPC6-201ENST00000377047 RANBP6O60518 1105 aaKnown RBP16■□□□□ 0.15
GPC6-201ENST00000377047 TNIP1Q15025 636 aa16■□□□□ 0.15
GPC6-201ENST00000377047 PRPF40BQ6NWY9 871 aaKnown RBP16■□□□□ 0.15
GPC6-201ENST00000377047 CFAP45Q9UL16 551 aa16■□□□□ 0.15
GPC6-201ENST00000377047 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
GPC6-201ENST00000377047 ZNF622Q969S3 477 aaKnown RBP eCLIP16■□□□□ 0.15
GPC6-201ENST00000377047 URB2Q14146 1524 aaKnown RBP16■□□□□ 0.15
GPC6-201ENST00000377047 TEX13AQ9BXU3 409 aaPredicted RBP16■□□□□ 0.15
GPC6-201ENST00000377047 CCP110O43303 1012 aa16■□□□□ 0.15
GPC6-201ENST00000377047 SLF2Q8IX21 1173 aa16■□□□□ 0.15
GPC6-201ENST00000377047 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
GPC6-201ENST00000377047 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
GPC6-201ENST00000377047 ATP5J2-PTCD1G3V325 749 aa15.99■□□□□ 0.15
GPC6-201ENST00000377047 LUC7LQ9NQ29 371 aaKnown RBP15.99■□□□□ 0.15
GPC6-201ENST00000377047 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
GPC6-201ENST00000377047 NOM1Q5C9Z4 860 aaKnown RBP15.98■□□□□ 0.15
GPC6-201ENST00000377047 DHX29Q7Z478 1369 aaKnown RBP15.98■□□□□ 0.15
GPC6-201ENST00000377047 SCAF11Q99590 1463 aaKnown RBP15.98■□□□□ 0.15
GPC6-201ENST00000377047 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
GPC6-201ENST00000377047 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
GPC6-201ENST00000377047 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
GPC6-201ENST00000377047 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
GPC6-201ENST00000377047 TOM1O60784 492 aa15.97■□□□□ 0.15
GPC6-201ENST00000377047 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
GPC6-201ENST00000377047 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
GPC6-201ENST00000377047 PPP1R42Q7Z4L9 355 aa15.97■□□□□ 0.15
GPC6-201ENST00000377047 FLIIQ13045 1269 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
GPC6-201ENST00000377047 ST5P78524 1137 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 ERCC4Q92889 916 aaPredicted RBP15.96■□□□□ 0.15
GPC6-201ENST00000377047 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 ZNF213O14771 459 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 IQCA1Q86XH1 822 aa15.96■□□□□ 0.15
GPC6-201ENST00000377047 CCDC82Q8N4S0 544 aa15.95■□□□□ 0.14
GPC6-201ENST00000377047 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms