RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GEMIN8Q9NWZ8 242 aaKnown RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 NUCB1Q02818 461 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 KRT32Q14532 448 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 SH3GL3Q99963 347 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 PFDN1O60925 122 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 TRIM35Q9UPQ4 493 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 CTAGE9A4FU28 777 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 VCX3BQ9H321 246 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 VCX3AQ9NNX9 186 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 CYP46A1Q9Y6A2 500 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 NEDD9Q14511 834 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 GBP5Q96PP8 586 aa7.67□□□□□ -1.18
UBR4-204ENST00000375254 NAP1L3Q99457 506 aaPredicted RBP7.67□□□□□ -1.18
UBR4-204ENST00000375254 VPS37CA5D8V6 355 aaPredicted RBP7.66□□□□□ -1.18
UBR4-204ENST00000375254 TOP1P11387 765 aaKnown RBP7.66□□□□□ -1.18
UBR4-204ENST00000375254 VPS36Q86VN1 386 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 TSPYL2Q9H2G4 693 aaPredicted RBP7.66□□□□□ -1.18
UBR4-204ENST00000375254 PLEKHH1Q9ULM0 1364 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 MPHOSPH9Q99550 1183 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 YY1AP1Q9H869 796 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 GMNNO75496 209 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 PAF1Q8N7H5 531 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 APBB1O00213 710 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 KANK3Q6NY19 840 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 BRD3Q15059 726 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 ALS2CR12Q96Q35 445 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 CCDC77Q9BR77 488 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 WDR78Q5VTH9 848 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
UBR4-204ENST00000375254 UTP14AQ9BVJ6 771 aaKnown RBP7.66□□□□□ -1.18
UBR4-204ENST00000375254 GFM2Q969S9 779 aaKnown RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 CCAR1Q8IX12 1150 aaKnown RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 EIF2AQ9BY44 585 aaKnown RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 ANKRD62A6NC57 917 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 ICE2Q659A1 982 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 RNF10Q8N5U6 811 aaKnown RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 IFIT2P09913 472 aaKnown RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 GNG11P61952 73 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 A0A087WUV0 522 aaPredicted RBP7.65□□□□□ -1.18
UBR4-204ENST00000375254 ERICH2A1L162 156 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 LRRD1A4D1F6 860 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 VGLL3A8MV65 326 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 KDM4AO75164 1064 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 PHLDB3Q6NSJ2 640 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 PIBF1Q8WXW3 757 aa7.65□□□□□ -1.18
UBR4-204ENST00000375254 PPFIA1Q13136 1202 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 ZSCAN23Q3MJ62 389 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 CASQ2O14958 399 aaPredicted RBP7.65□□□□□ -1.19
UBR4-204ENST00000375254 RAB11FIP4Q86YS3 637 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 ATRIPQ8WXE1 791 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 CACNA2D4Q7Z3S7 1137 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.19
UBR4-204ENST00000375254 FAN1Q9Y2M0 1017 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 MIER3Q7Z3K6 550 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 CPLX4Q7Z7G2 160 aa7.65□□□□□ -1.19
UBR4-204ENST00000375254 C16orf45Q96MC5 204 aaPredicted RBP7.65□□□□□ -1.19
UBR4-204ENST00000375254 MX1P20591 662 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 LRRC45Q96CN5 670 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 VAV2P52735 878 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 MCTP2Q6DN12 878 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.64□□□□□ -1.19
UBR4-204ENST00000375254 SAMD15Q9P1V8 674 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 DYNC1I2Q13409 638 aaKnown RBP7.64□□□□□ -1.19
UBR4-204ENST00000375254 NBPF9Q3BBW0 867 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 CNTROBQ8N137 903 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.64□□□□□ -1.191e-8■■□□□ 11.6
UBR4-204ENST00000375254 NCAPGQ9BPX3 1015 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 TRIM4Q9C037 500 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 SEPT11Q9NVA2 429 aaKnown RBP7.64□□□□□ -1.19
UBR4-204ENST00000375254 SPAG9O60271 1321 aaKnown RBP7.64□□□□□ -1.19
UBR4-204ENST00000375254 CFAP100Q494V2 611 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 PODNQ7Z5L7 613 aa7.64□□□□□ -1.19
UBR4-204ENST00000375254 CDKL5O76039 1030 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 CCDC57Q2TAC2 916 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 HDGFL2Q7Z4V5 671 aaPredicted RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 TBC1D2Q9BYX2 928 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 MTUS1Q9ULD2 1270 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 CFAP58Q5T655 872 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 G3BP1Q13283 466 aaKnown RBP eCLIP7.63□□□□□ -1.191e-6■□□□□ 10
UBR4-204ENST00000375254 ERCC6LQ2NKX8 1250 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 DHX37Q8IY37 1157 aaKnown RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 JAKMIP2Q96AA8 810 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 MAGEA9P43362 315 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 NOL8Q76FK4 1167 aaKnown RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 CTNNBL1Q8WYA6 563 aaPredicted RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 ME1P48163 572 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 IRX4P78413 519 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 RASEFQ8IZ41 740 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 CTAGE1Q96RT6 745 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 USP6NLQ92738 828 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 RAB3IPQ96QF0 476 aaPredicted RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 MVPQ14764 893 aaKnown RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 APLFQ8IW19 511 aaPredicted RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 SAAL1Q96ER3 474 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 BMP2KQ9NSY1 1161 aaPredicted RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 ROCK1Q13464 1354 aa7.63□□□□□ -1.19
UBR4-204ENST00000375254 SMG6Q86US8 1419 aaKnown RBP7.63□□□□□ -1.19
UBR4-204ENST00000375254 ZNF165P49910 485 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms