RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 TAS1R3Q7RTX0 852 aa8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 SERTAD1Q9UHV2 236 aa8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 MAFBQ9Y5Q3 323 aaPredicted RBP8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
RNU6-553P-201ENST00000364047 VSIG8P0DPA2 414 aa8.54□□□□□ -1.04
RNU6-553P-201ENST00000364047 GNASQ5JWF2 1037 aa8.54□□□□□ -1.04
RNU6-553P-201ENST00000364047 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
RNU6-553P-201ENST00000364047 GMPRP36959 345 aa8.53□□□□□ -1.04
RNU6-553P-201ENST00000364047 ATP1A2P50993 1020 aa8.53□□□□□ -1.04
RNU6-553P-201ENST00000364047 WDR44Q5JSH3 913 aa8.53□□□□□ -1.04
RNU6-553P-201ENST00000364047 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
RNU6-553P-201ENST00000364047 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
RNU6-553P-201ENST00000364047 CDC14CA4D256 554 aa8.52□□□□□ -1.05
RNU6-553P-201ENST00000364047 PHKA2P46019 1235 aa8.52□□□□□ -1.05
RNU6-553P-201ENST00000364047 SMTNP53814 917 aa8.52□□□□□ -1.05
RNU6-553P-201ENST00000364047 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
RNU6-553P-201ENST00000364047 DYRK1BQ9Y463 629 aa8.52□□□□□ -1.05
RNU6-553P-201ENST00000364047 WIPF1O43516 503 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 CLDN10P78369 228 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 RIPOR1Q6ZS17 1223 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 PPARGC1BQ86YN6 1023 aaKnown RBP8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 RHBDD1Q8TEB9 315 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 GAS2L1Q99501 681 aaPredicted RBP8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 KIAA1024Q9UPX6 916 aa8.51□□□□□ -1.05
RNU6-553P-201ENST00000364047 BACH1O14867 736 aa8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 C4orf17Q53FE4 359 aa8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 VWA5B2Q8N398 1253 aa8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 NANOS1Q8WY41 292 aaKnown RBP8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 SLC4A9Q96Q91 983 aa8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 ZNF358Q9NW07 568 aa8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 CUEDC1Q9NWM3 386 aaPredicted RBP8.5□□□□□ -1.05
RNU6-553P-201ENST00000364047 A6NJY4 79 aa8.49□□□□□ -1.05
RNU6-553P-201ENST00000364047 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
RNU6-553P-201ENST00000364047 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
RNU6-553P-201ENST00000364047 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
RNU6-553P-201ENST00000364047 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
RNU6-553P-201ENST00000364047 ZBTB7BO15156 539 aaPredicted RBP8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 RASA1P20936 1047 aa8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 PLA2G4AP47712 749 aa8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 MTFR1Q15390 333 aa8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 GPR161Q8N6U8 529 aaKnown RBP8.48□□□□□ -1.05
RNU6-553P-201ENST00000364047 A0A1B0GTH6 734 aa8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 F11P03951 625 aa8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 NIFKQ9BYG3 293 aaKnown RBP8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 GPAMQ9HCL2 828 aa8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
RNU6-553P-201ENST00000364047 H7C1W4 665 aa8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 CDK2AP1O14519 115 aa8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 CFAP70Q5T0N1 1121 aa8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 SIX5Q8N196 739 aa8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP3Q9Y6I4 520 aa8.46□□□□□ -1.06
RNU6-553P-201ENST00000364047 DBN1Q16643 649 aa8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 GMCL1Q96IK5 515 aa8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 VRTNQ9H8Y1 702 aa8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 SCHIP1Q9P0W5 487 aaPredicted RBP8.45□□□□□ -1.06
RNU6-553P-201ENST00000364047 SFI1A8K8P3 1242 aa8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 MSX1P28360 303 aa8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 CRTC2Q53ET0 693 aaPredicted RBP8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 CABP1Q9NZU7 370 aa8.44□□□□□ -1.06
RNU6-553P-201ENST00000364047 CSB-PGBD3P0DP91 1061 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 RFX1P22670 979 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 EPHA4P54764 986 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 PGBD3Q8N328 593 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 NUCKS1Q9H1E3 243 aaKnown RBP8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 RUBCNLQ9H714 662 aa8.43□□□□□ -1.06
RNU6-553P-201ENST00000364047 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L12C9JPN9 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L21D6R901 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L18D6R9N7 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L22D6RA61 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L17D6RBQ6 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L19D6RCP7 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L20D6RJB6 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 DKK1O94907 266 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 SEC13P55735 322 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 FOXK2Q01167 660 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 KRT76Q01546 638 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 PTK7Q13308 1070 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
RNU6-553P-201ENST00000364047 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms