RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 GPR162Q16538 588 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 METTL24Q5JXM2 366 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC63Q8NA47 563 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 TSG101Q99816 390 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 CABP5Q9NP86 173 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 RFC4P35249 363 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 IFFO1Q0D2I5 559 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 CLSTN2Q9H4D0 955 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 CACNA2D4Q7Z3S7 1137 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 ITM2BQ9Y287 266 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-203ENST00000357654 CECR2Q9BXF3 1484 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 FIBPO43427 364 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 ARID5AQ03989 594 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 FLIIQ13045 1269 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 SRRTQ9BXP5 876 aaKnown RBP6.75□□□□□ -1.33
BRCA1-203ENST00000357654 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 SMARCA4P51532 1647 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 PICALMQ13492 652 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 RASA3Q14644 834 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 KLHL10Q6JEL2 608 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 RSPH3Q86UC2 560 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 RNF34Q969K3 372 aa6.75□□□□□ -1.33
BRCA1-203ENST00000357654 PAIP2Q9BPZ3 127 aaKnown RBP6.75□□□□□ -1.33
BRCA1-203ENST00000357654 KIF5CO60282 957 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 NCBP1Q09161 790 aaKnown RBP6.74□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC102AQ96A19 550 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 SPATA32Q96LK8 384 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ANO3Q9BYT9 981 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 API5Q9BZZ5 524 aaKnown RBP6.74□□□□□ -1.33
BRCA1-203ENST00000357654 TMOD3Q9NYL9 352 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ROCK1Q13464 1354 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC30Q5VVM6 783 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 FNDC3AQ9Y2H6 1198 aaKnown RBP6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ERLIN1O75477 346 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 PPFIA1Q13136 1202 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 GINS2Q9Y248 185 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 CRCPO75575 148 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 MXRA7P84157 204 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ZSCAN25Q6NSZ9 544 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 TXLNBQ8N3L3 684 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF397Q8NF99 534 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-203ENST00000357654 C8orf37Q96NL8 207 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 DACH1Q9UI36 760 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 FCHSD2O94868 740 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ST5P78524 1137 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 NBPF8Q3BBV2 869 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 NBPF14Q5TI25 921 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 OSCARQ8IYS5 282 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 ACSBG1Q96GR2 724 aa6.74□□□□□ -1.33
BRCA1-203ENST00000357654 TMEM110-MUSTN1A8MSY1 372 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 SPATA17Q96L03 361 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 UBAP1LF5GYI3 381 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 SKOR2Q2VWA4 1001 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-203ENST00000357654 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-203ENST00000357654 SMC1BQ8NDV3 1235 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 RB1CC1Q8TDY2 1594 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-203ENST00000357654 TCHPQ9BT92 498 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 STARD3NLO95772 234 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 GEN1Q17RS7 908 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF530Q6P9A1 599 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-203ENST00000357654 FAM200AQ8TCP9 573 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 ZNF287Q9HBT7 754 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 GPHNQ9NQX3 736 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC144CPQ8IYA2 1237 aa6.73□□□□□ -1.33
BRCA1-203ENST00000357654 ERCC3P19447 782 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 GPTP24298 496 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CNGA1P29973 690 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 ACTN2P35609 894 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 TDRD12Q587J7 1177 aaKnown RBP6.72□□□□□ -1.33
BRCA1-203ENST00000357654 AACSQ86V21 672 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 IKBKGQ9Y6K9 419 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 FHAD1B1AJZ9 1412 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC160A6NGH7 325 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC174Q6PII3 467 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CACYBPQ9HB71 228 aaKnown RBP6.72□□□□□ -1.33
BRCA1-203ENST00000357654 ANKFY1Q9P2R3 1169 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 HDAC9Q9UKV0 1011 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 BAG4O95429 457 aaKnown RBP6.72□□□□□ -1.33
BRCA1-203ENST00000357654 MPHOSPH9Q99550 1183 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 APAF1O14727 1248 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 ABL1P00519 1130 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 PDE4AP27815 886 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 C4orf50Q6ZRC1 276 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CCDC65Q8IXS2 484 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
BRCA1-203ENST00000357654 CDCA7Q9BWT1 371 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-203ENST00000357654 WRNQ14191 1432 aaPredicted RBP eCLIP6.72□□□□□ -1.331e-6■■■■■ 58.5
BRCA1-203ENST00000357654 PPP2R5DQ14738 602 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 CEP135Q66GS9 1140 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 TMEM132EQ6IEE7 984 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 LUZP1Q86V48 1076 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.33
BRCA1-203ENST00000357654 SPA17Q15506 151 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 MAP7D1Q3KQU3 841 aa6.71□□□□□ -1.33
BRCA1-203ENST00000357654 CCT6BQ92526 530 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms