RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 GCC1Q96CN9 775 aa21.38■■□□□ 1.01
SSR4-201ENST00000320857 CHMP4AQ9BY43 222 aa21.38■■□□□ 1.01
SSR4-201ENST00000320857 CHRNA2Q15822 529 aa21.37■■□□□ 1.01
SSR4-201ENST00000320857 PLEKHG2Q9H7P9 1386 aa21.37■■□□□ 1.01
SSR4-201ENST00000320857 TEFQ10587 303 aa21.37■■□□□ 1.01
SSR4-201ENST00000320857 LGR6Q9HBX8 967 aa21.37■■□□□ 1.01
SSR4-201ENST00000320857 NLRP2Q9NX02 1062 aa21.37■■□□□ 1.01
SSR4-201ENST00000320857 NOP58Q9Y2X3 529 aaKnown RBP21.37■■□□□ 1.01
SSR4-201ENST00000320857 ABCA3Q99758 1704 aa21.36■■□□□ 1.01
SSR4-201ENST00000320857 RNMTO43148 476 aaKnown RBP21.36■■□□□ 1.01
SSR4-201ENST00000320857 NUCB1Q02818 461 aa21.36■■□□□ 1.01
SSR4-201ENST00000320857 C1orf115Q9H7X2 142 aa21.36■■□□□ 1.01
SSR4-201ENST00000320857 NUTM2BA6NNL0 878 aaPredicted RBP21.35■■□□□ 1.01
SSR4-201ENST00000320857 NUTM2EB1AL46 878 aaPredicted RBP21.35■■□□□ 1.01
SSR4-201ENST00000320857 CCT4P50991 539 aaKnown RBP21.35■■□□□ 1.01
SSR4-201ENST00000320857 NUTM2AQ8IVF1 878 aaPredicted RBP21.35■■□□□ 1.01
SSR4-201ENST00000320857 JCADQ9P266 1359 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 HOXB7P09629 217 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 CSB-PGBD3P0DP91 1061 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 G2E3Q7L622 706 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 DDRGK1Q96HY6 314 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
SSR4-201ENST00000320857 MPRIPQ6WCQ1 1025 aa21.34■■□□□ 1.01
SSR4-201ENST00000320857 EIF4A1P60842 406 aaKnown RBP21.33■■□□□ 1
SSR4-201ENST00000320857 PRDM11Q9NQV5 511 aa21.33■■□□□ 1
SSR4-201ENST00000320857 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
SSR4-201ENST00000320857 BTBD11A6QL63 1104 aa21.32■■□□□ 1
SSR4-201ENST00000320857 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
SSR4-201ENST00000320857 FLIIQ13045 1269 aa21.32■■□□□ 1
SSR4-201ENST00000320857 ANP32EQ9BTT0 268 aa21.32■■□□□ 1
SSR4-201ENST00000320857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
SSR4-201ENST00000320857 HDGFL1Q5TGJ6 251 aa21.31■■□□□ 1
SSR4-201ENST00000320857 CHD1LQ86WJ1 897 aa21.31■■□□□ 1
SSR4-201ENST00000320857 SIRT2Q8IXJ6 389 aa21.31■■□□□ 1
SSR4-201ENST00000320857 RPAP2Q8IXW5 612 aaPredicted RBP21.31■■□□□ 1
SSR4-201ENST00000320857 KDM3BQ7LBC6 1761 aa21.31■■□□□ 1
SSR4-201ENST00000320857 ADAMTS7Q9UKP4 1686 aa21.31■■□□□ 1
SSR4-201ENST00000320857 SPG7Q9UQ90 795 aa21.3■■□□□ 1
SSR4-201ENST00000320857 MEGF6O75095 1541 aa21.29■■□□□ 1
SSR4-201ENST00000320857 FKBP5Q13451 457 aaPredicted RBP21.29■■□□□ 1
SSR4-201ENST00000320857 SLC4A10Q6U841 1118 aa21.29■■□□□ 1
SSR4-201ENST00000320857 ANKRD44Q8N8A2 993 aa21.29■■□□□ 1
SSR4-201ENST00000320857 ANKRD45Q5TZF3 282 aa21.28■■□□□ 1
SSR4-201ENST00000320857 NECTIN2Q92692 538 aa21.28■■□□□ 1
SSR4-201ENST00000320857 WDR17Q8IZU2 1322 aa21.28■■□□□ 1
SSR4-201ENST00000320857 F6X3S4 739 aa21.28■■□□□ 1
SSR4-201ENST00000320857 LNPKQ9C0E8 428 aa21.28■■□□□ 1
SSR4-201ENST00000320857 CACNA1FO60840 1977 aa21.27■■□□□ 1
SSR4-201ENST00000320857 ADAMTS2O95450 1211 aa21.27■■□□□ 1
SSR4-201ENST00000320857 MEIS3Q99687 375 aa21.27■■□□□ 1
SSR4-201ENST00000320857 COL5A2P05997 1499 aaPredicted RBP21.27■□□□□ 0.99
SSR4-201ENST00000320857 ATP10DQ9P241 1426 aa21.26■□□□□ 0.99
SSR4-201ENST00000320857 PKD1L3Q7Z443 1732 aa21.26■□□□□ 0.99
SSR4-201ENST00000320857 DCTPP1Q9H773 170 aa21.26■□□□□ 0.99
SSR4-201ENST00000320857 SIPA1L3O60292 1781 aaPredicted RBP21.26■□□□□ 0.99
SSR4-201ENST00000320857 PXDNLA1KZ92 1463 aa21.25■□□□□ 0.99
SSR4-201ENST00000320857 CEP85Q6P2H3 762 aa21.25■□□□□ 0.99
SSR4-201ENST00000320857 COL22A1Q8NFW1 1626 aaPredicted RBP21.25■□□□□ 0.99
SSR4-201ENST00000320857 KCNQ3O43525 872 aa21.24■□□□□ 0.99
SSR4-201ENST00000320857 UPF2Q9HAU5 1272 aaKnown RBP21.24■□□□□ 0.99
SSR4-201ENST00000320857 PHKG2P15735 406 aa21.24■□□□□ 0.99
SSR4-201ENST00000320857 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
SSR4-201ENST00000320857 SCN11AQ9UI33 1791 aa21.24■□□□□ 0.99
SSR4-201ENST00000320857 SPATA31A6Q5VVP1 1343 aa21.23■□□□□ 0.99
SSR4-201ENST00000320857 HMMRO75330 724 aa21.23■□□□□ 0.99
SSR4-201ENST00000320857 GNAI3P08754 354 aa21.23■□□□□ 0.99
SSR4-201ENST00000320857 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
SSR4-201ENST00000320857 TOM1L2Q6ZVM7 507 aa21.22■□□□□ 0.99
SSR4-201ENST00000320857 PARP4Q9UKK3 1724 aaKnown RBP21.22■□□□□ 0.99
SSR4-201ENST00000320857 GNAI2P04899 355 aa21.21■□□□□ 0.99
SSR4-201ENST00000320857 MEX3CQ5U5Q3 659 aaKnown RBP21.21■□□□□ 0.99
SSR4-201ENST00000320857 KDM6AO15550 1401 aaPredicted RBP21.21■□□□□ 0.99
SSR4-201ENST00000320857 CARD10Q9BWT7 1032 aa21.21■□□□□ 0.99
SSR4-201ENST00000320857 HEG1Q9ULI3 1381 aa21.2■□□□□ 0.98
SSR4-201ENST00000320857 LRP6O75581 1613 aa21.2■□□□□ 0.98
SSR4-201ENST00000320857 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
SSR4-201ENST00000320857 CHPF2Q9P2E5 772 aa21.2■□□□□ 0.98
SSR4-201ENST00000320857 GIGYF1O75420 1035 aaPredicted RBP21.19■□□□□ 0.98
SSR4-201ENST00000320857 SEC24BO95487 1268 aa21.19■□□□□ 0.98
SSR4-201ENST00000320857 SLC52A2Q9HAB3 445 aa21.19■□□□□ 0.98
SSR4-201ENST00000320857 CYP27B1O15528 508 aa21.18■□□□□ 0.98
SSR4-201ENST00000320857 BMP2KLQ5H9B9 411 aa21.18■□□□□ 0.98
SSR4-201ENST00000320857 PHAXQ9H814 394 aaKnown RBP21.18■□□□□ 0.98
SSR4-201ENST00000320857 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
SSR4-201ENST00000320857 N4BP2Q86UW6 1770 aaPredicted RBP21.18■□□□□ 0.98
SSR4-201ENST00000320857 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
SSR4-201ENST00000320857 C8orf37Q96NL8 207 aa21.17■□□□□ 0.98
SSR4-201ENST00000320857 DAXXQ9UER7 740 aaPredicted RBP21.17■□□□□ 0.98
SSR4-201ENST00000320857 MRC1P22897 1456 aa21.17■□□□□ 0.98
SSR4-201ENST00000320857 EVA1CP58658 441 aa21.16■□□□□ 0.98
SSR4-201ENST00000320857 COL14A1Q05707 1796 aaKnown RBP21.15■□□□□ 0.98
SSR4-201ENST00000320857 LARP1Q6PKG0 1096 aaKnown RBP21.15■□□□□ 0.98
SSR4-201ENST00000320857 SRCIN1Q9C0H9 1055 aa21.15■□□□□ 0.98
SSR4-201ENST00000320857 STRN4Q9NRL3 753 aa21.15■□□□□ 0.98
SSR4-201ENST00000320857 IL2RBP14784 551 aa21.14■□□□□ 0.97
SSR4-201ENST00000320857 ZNF790Q6PG37 636 aa21.14■□□□□ 0.97
SSR4-201ENST00000320857 ZCRB1Q8TBF4 217 aaKnown RBP21.14■□□□□ 0.97
SSR4-201ENST00000320857 DNAAF4Q8WXU2 420 aa21.14■□□□□ 0.97
SSR4-201ENST00000320857 PCDH11XQ9BZA7 1347 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms