RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 SENP2Q9HC62 589 aa8.98□□□□□ -0.97
CSN3-201ENST00000304954 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
CSN3-201ENST00000304954 CHMP3Q9Y3E7 222 aa8.98□□□□□ -0.97
CSN3-201ENST00000304954 TMEM229AB2RXF0 380 aa8.97□□□□□ -0.97
CSN3-201ENST00000304954 Q6ZNB5 142 aa8.97□□□□□ -0.97
CSN3-201ENST00000304954 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
CSN3-201ENST00000304954 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
CSN3-201ENST00000304954 DKK1O94907 266 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 RNF144AP50876 292 aaPredicted RBP8.96□□□□□ -0.98
CSN3-201ENST00000304954 SMTNP53814 917 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 TLR1Q15399 786 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 KDF1Q8NAX2 398 aaPredicted RBP8.96□□□□□ -0.98
CSN3-201ENST00000304954 RETREG2Q8NC44 543 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSN3-201ENST00000304954 HINFPQ9BQA5 517 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
CSN3-201ENST00000304954 POLMQ9NP87 494 aaPredicted RBP8.96□□□□□ -0.98
CSN3-201ENST00000304954 ZMIZ1Q9ULJ6 1067 aa8.96□□□□□ -0.98
CSN3-201ENST00000304954 A6NJY4 79 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 IL2RAP01589 272 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 MTFR1Q15390 333 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 TMEM164Q5U3C3 297 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 ATP13A2Q9NQ11 1180 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
CSN3-201ENST00000304954 SFI1A8K8P3 1242 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 CDK2AP1O14519 115 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 PDIA4P13667 645 aaKnown RBP8.94□□□□□ -0.98
CSN3-201ENST00000304954 CENPCQ03188 943 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 C6orf118Q5T5N4 469 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 CLP1Q92989 425 aaKnown RBP8.94□□□□□ -0.98
CSN3-201ENST00000304954 PURBQ96QR8 312 aaKnown RBP8.94□□□□□ -0.98
CSN3-201ENST00000304954 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
CSN3-201ENST00000304954 SERTAD1Q9UHV2 236 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 HRH3Q9Y5N1 445 aa8.94□□□□□ -0.98
CSN3-201ENST00000304954 TTLL8A6PVC2 850 aa8.93□□□□□ -0.98
CSN3-201ENST00000304954 PATL2C9JE40 543 aaKnown RBP8.93□□□□□ -0.98
CSN3-201ENST00000304954 WDR44Q5JSH3 913 aa8.93□□□□□ -0.98
CSN3-201ENST00000304954 GNASQ5JWF2 1037 aa8.93□□□□□ -0.98
CSN3-201ENST00000304954 TMEM214Q6NUQ4 689 aaKnown RBP8.93□□□□□ -0.98
CSN3-201ENST00000304954 STK32AQ8WU08 396 aa8.93□□□□□ -0.98
CSN3-201ENST00000304954 INSM2Q96T92 566 aaPredicted RBP8.93□□□□□ -0.98
CSN3-201ENST00000304954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSN3-201ENST00000304954 TRIM46Q7Z4K8 759 aa8.92□□□□□ -0.98
CSN3-201ENST00000304954 TRAIPQ9BWF2 469 aa8.92□□□□□ -0.98
CSN3-201ENST00000304954 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
CSN3-201ENST00000304954 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 BMP1P13497 986 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 IGFBP4P22692 258 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 PPARGC1BQ86YN6 1023 aaKnown RBP8.91□□□□□ -0.98
CSN3-201ENST00000304954 TSEN2Q8NCE0 465 aaKnown RBP8.91□□□□□ -0.98
CSN3-201ENST00000304954 RHBDD1Q8TEB9 315 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 ZFP42Q96MM3 310 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 GRIP2Q9C0E4 1043 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
CSN3-201ENST00000304954 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
CSN3-201ENST00000304954 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
CSN3-201ENST00000304954 ST8SIA5O15466 376 aa8.9□□□□□ -0.98
CSN3-201ENST00000304954 FOXO3O43524 673 aa8.9□□□□□ -0.98
CSN3-201ENST00000304954 PSMA6P60900 246 aaKnown RBP8.9□□□□□ -0.98
CSN3-201ENST00000304954 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.9□□□□□ -0.98
CSN3-201ENST00000304954 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
CSN3-201ENST00000304954 STAG2Q8N3U4 1231 aa8.9□□□□□ -0.98
CSN3-201ENST00000304954 NIFKQ9BYG3 293 aaKnown RBP8.9□□□□□ -0.98
CSN3-201ENST00000304954 FHDC1Q9C0D6 1143 aaPredicted RBP8.9□□□□□ -0.98
CSN3-201ENST00000304954 CTSOP43234 321 aaPredicted RBP8.89□□□□□ -0.99
CSN3-201ENST00000304954 EPHA4P54764 986 aa8.89□□□□□ -0.99
CSN3-201ENST00000304954 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
CSN3-201ENST00000304954 MAN1A2O60476 641 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 FOXK2Q01167 660 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 FAM69CQ0P6D2 419 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 FOXD4L5Q5VV16 416 aaPredicted RBP8.88□□□□□ -0.99
CSN3-201ENST00000304954 TAS1R3Q7RTX0 852 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 TNS4Q8IZW8 715 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 C1orf216Q8TAB5 229 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
CSN3-201ENST00000304954 ATAD2Q6PL18 1390 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 BRD1O95696 1058 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 STAU1O95793 577 aaKnown RBP8.87□□□□□ -0.99
CSN3-201ENST00000304954 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 WEE1P30291 646 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 KCTD17Q8N5Z5 321 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 TRIM47Q96LD4 638 aa8.87□□□□□ -0.99
CSN3-201ENST00000304954 PPP1R12BO60237 982 aaPredicted RBP8.86□□□□□ -0.99
CSN3-201ENST00000304954 PTCD1O75127 700 aaKnown RBP8.86□□□□□ -0.99
CSN3-201ENST00000304954 TEAD4Q15561 434 aa8.86□□□□□ -0.99
CSN3-201ENST00000304954 NBPF1Q3BBV0 1214 aa8.86□□□□□ -0.99
CSN3-201ENST00000304954 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
CSN3-201ENST00000304954 COL26A1Q96A83 441 aa8.86□□□□□ -0.99
CSN3-201ENST00000304954 CABP1Q9NZU7 370 aa8.86□□□□□ -0.99
CSN3-201ENST00000304954 CXXC1Q9P0U4 656 aaPredicted RBP8.86□□□□□ -0.99
CSN3-201ENST00000304954 SERTM1A2A2V5 107 aa8.85□□□□□ -0.99
CSN3-201ENST00000304954 TSPAN10Q9H1Z9 355 aaPredicted RBP8.85□□□□□ -0.99
CSN3-201ENST00000304954 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
CSN3-201ENST00000304954 HIRAP54198 1017 aaPredicted RBP8.84□□□□□ -0.99
CSN3-201ENST00000304954 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
CSN3-201ENST00000304954 GPC6Q9Y625 555 aaPredicted RBP8.84□□□□□ -0.99
CSN3-201ENST00000304954 PRMT3O60678 531 aa8.83□□□□□ -1
CSN3-201ENST00000304954 SSFA2P28290 1259 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms