RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 PPIP5K1Q6PFW1 1433 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
VIL1-201ENST00000248444 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
VIL1-201ENST00000248444 PPP1R42Q7Z4L9 355 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
VIL1-201ENST00000248444 MAP3K1Q13233 1512 aa11.88□□□□□ -0.51
VIL1-201ENST00000248444 DDB1Q16531 1140 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 KINO60870 393 aaKnown RBP11.87□□□□□ -0.51
VIL1-201ENST00000248444 ZNF287Q9HBT7 754 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
VIL1-201ENST00000248444 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 FAM83GA6ND36 823 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 CHMP4BP1P59074 171 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
VIL1-201ENST00000248444 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
VIL1-201ENST00000248444 RAB11FIP3O75154 756 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 CCDC8Q9H0W5 538 aaPredicted RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 CWC25Q9NXE8 425 aaPredicted RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 LRRFIP2Q9Y608 721 aaKnown RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 FIBPO43427 364 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 CDKL5O76039 1030 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 MAP3K12Q12852 859 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 ITSN2Q9NZM3 1697 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 DISP3Q9P2K9 1392 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 FANCIQ9NVI1 1328 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 WDR78Q5VTH9 848 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 CDC5LQ99459 802 aaKnown RBP11.86□□□□□ -0.51
VIL1-201ENST00000248444 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
VIL1-201ENST00000248444 NUP153P49790 1475 aaKnown RBP11.85□□□□□ -0.51
VIL1-201ENST00000248444 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
VIL1-201ENST00000248444 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
VIL1-201ENST00000248444 NSD2O96028 1365 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 SSBP05455 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
VIL1-201ENST00000248444 ALDH1L2Q3SY69 923 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 ZMYM3Q14202 1370 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 HSP90AB2PQ58FF8 381 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
VIL1-201ENST00000248444 MATR3P43243 847 aaKnown RBP eCLIP11.84□□□□□ -0.51
VIL1-201ENST00000248444 NAPBQ9H115 298 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
VIL1-201ENST00000248444 MX1P20591 662 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 FLIIQ13045 1269 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 PAF1Q8N7H5 531 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 GSE1Q14687 1217 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 SEC63Q9UGP8 760 aaKnown RBP11.84□□□□□ -0.51
VIL1-201ENST00000248444 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 SYCP1Q15431 976 aa11.84□□□□□ -0.51
VIL1-201ENST00000248444 ZNF444Q8N0Y2 327 aaPredicted RBP11.84□□□□□ -0.51
VIL1-201ENST00000248444 KRT32Q14532 448 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 CCDC96Q2M329 555 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
VIL1-201ENST00000248444 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 SETDB2Q96T68 719 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 KIAA0556O60303 1618 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 ME1P48163 572 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 ANKRD36BQ8N2N9 1353 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
VIL1-201ENST00000248444 SMC2O95347 1197 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 LARP1BQ659C4 914 aaKnown RBP11.83□□□□□ -0.52
VIL1-201ENST00000248444 TTLL5Q6EMB2 1281 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 EIF4G3O43432 1585 aaKnown RBP11.83□□□□□ -0.52
VIL1-201ENST00000248444 PRPF40AO75400 957 aaKnown RBP11.83□□□□□ -0.52
VIL1-201ENST00000248444 ANXA1P04083 346 aa11.83□□□□□ -0.52
VIL1-201ENST00000248444 RANBP6O60518 1105 aaKnown RBP11.82□□□□□ -0.52
VIL1-201ENST00000248444 IL2RBP14784 551 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 ABCC10Q5T3U5 1492 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 CASTP20810 708 aaKnown RBP11.82□□□□□ -0.52
VIL1-201ENST00000248444 RARSP54136 660 aaKnown RBP11.82□□□□□ -0.52
VIL1-201ENST00000248444 SLC4A8Q2Y0W8 1093 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 TFCP2L1Q9NZI6 479 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 CTTNBP2Q8WZ74 1663 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 FILIP1LQ4L180 1135 aa11.82□□□□□ -0.52
VIL1-201ENST00000248444 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
VIL1-201ENST00000248444 MBIPQ9NS73 344 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 FAM13BQ9NYF5 915 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
VIL1-201ENST00000248444 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 WASF1Q92558 559 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 TANGO6Q9C0B7 1094 aa11.81□□□□□ -0.52
VIL1-201ENST00000248444 PDCL3Q9H2J4 239 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms