Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 AC119177.1-201ENSMUST00000227647 1332 ntBASIC28.19■■■□□ 2.1
Rtl1Q7M732 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtl1Q7M732 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Rtl1Q7M732 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Gm43332-201ENSMUST00000202511 1044 ntBASIC28.18■■■□□ 2.1
Rtl1Q7M732 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC28.18■■■□□ 2.1
Rtl1Q7M732 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC28.17■■■□□ 2.1
Rtl1Q7M732 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Gm37935-201ENSMUST00000192012 982 ntBASIC28.16■■■□□ 2.1
Rtl1Q7M732 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Rtl1Q7M732 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC28.15■■■□□ 2.1
Rtl1Q7M732 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Gm15358-201ENSMUST00000119249 520 ntBASIC28.15■■■□□ 2.1
Rtl1Q7M732 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtl1Q7M732 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rtl1Q7M732 Best4-ps-201ENSMUST00000129783 1380 ntBASIC28.14■■■□□ 2.1
Rtl1Q7M732 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rtl1Q7M732 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rtl1Q7M732 Gm27300-201ENSMUST00000184085 97 ntBASIC28.14■■■□□ 2.1
Rtl1Q7M732 Gm27335-201ENSMUST00000184758 97 ntBASIC28.14■■■□□ 2.1
Rtl1Q7M732 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC28.14■■■□□ 2.1
Rtl1Q7M732 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Rtl1Q7M732 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtl1Q7M732 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Gm7286-201ENSMUST00000182691 1007 ntBASIC28.12■■■□□ 2.09
Rtl1Q7M732 Gm5253-201ENSMUST00000187104 1025 ntBASIC28.12■■■□□ 2.09
Rtl1Q7M732 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtl1Q7M732 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 121.3 ms