Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU6-916P-201ENST00000516088 109 ntBASIC-1.61□□□□□ -2.67
SHANK1Q9Y566 RNU6-620P-201ENST00000384017 96 ntBASIC-1.61□□□□□ -2.67
SHANK1Q9Y566 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-638P-201ENST00000516582 104 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-627P-201ENST00000364032 102 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-614P-201ENST00000384369 107 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 U6.59-201ENST00000615686 107 ntBASIC-1.62□□□□□ -2.67
SHANK1Q9Y566 RNU6-753P-201ENST00000363926 107 ntBASIC-1.63□□□□□ -2.67
SHANK1Q9Y566 MIR548F3-201ENST00000408509 87 ntBASIC-1.65□□□□□ -2.67
SHANK1Q9Y566 AC079150.2-201ENST00000443733 78 ntBASIC-1.65□□□□□ -2.67
SHANK1Q9Y566 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.68□□□□□ -2.68
SHANK1Q9Y566 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.71□□□□□ -2.68
SHANK1Q9Y566 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 RNU6-133P-201ENST00000383989 107 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 U6.103-201ENST00000637085 61 ntBASIC-1.72□□□□□ -2.69
SHANK1Q9Y566 SNORD111B-201ENST00000408587 80 ntBASIC-1.73□□□□□ -2.69
SHANK1Q9Y566 MTND4LP19-201ENST00000403051 166 ntBASIC-1.78□□□□□ -2.69
SHANK1Q9Y566 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.86□□□□□ -2.71
SHANK1Q9Y566 RNU6-724P-201ENST00000390958 105 ntBASIC-1.87□□□□□ -2.71
SHANK1Q9Y566 RNU6-892P-201ENST00000410335 99 ntBASIC-1.87□□□□□ -2.71
SHANK1Q9Y566 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-2□□□□□ -2.73
SHANK1Q9Y566 RNY4P19-201ENST00000362530 96 ntBASIC-2.02□□□□□ -2.73
SHANK1Q9Y566 RNU4-37P-201ENST00000410214 84 ntBASIC-2.02□□□□□ -2.73
SHANK1Q9Y566 MIR548T-201ENST00000408369 74 ntBASIC-2.06□□□□□ -2.74
Retrieved 24 of 98,524 protein–RNA pairs in 255.1 ms