Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.99□□□□□ -2.57
COL17A1Q9UMD9 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.99□□□□□ -2.57
COL17A1Q9UMD9 SNORD54-201ENST00000459159 67 ntBASIC-1.03□□□□□ -2.57
COL17A1Q9UMD9 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.05□□□□□ -2.58
COL17A1Q9UMD9 RNU6-665P-201ENST00000384639 107 ntBASIC-1.07□□□□□ -2.58
COL17A1Q9UMD9 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.08□□□□□ -2.58
COL17A1Q9UMD9 RNU6-803P-201ENST00000516034 102 ntBASIC-1.13□□□□□ -2.59
COL17A1Q9UMD9 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.17□□□□□ -2.6
COL17A1Q9UMD9 MIR509-1-201ENST00000385265 94 ntBASIC-1.17□□□□□ -2.6
COL17A1Q9UMD9 MIR509-2-201ENST00000390724 91 ntBASIC-1.17□□□□□ -2.6
COL17A1Q9UMD9 RNY4P10-201ENST00000365571 96 ntBASIC-1.19□□□□□ -2.6
COL17A1Q9UMD9 RNA5SP106-201ENST00000517274 100 ntBASIC-1.19□□□□□ -2.6
COL17A1Q9UMD9 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.2□□□□□ -2.6
COL17A1Q9UMD9 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.2□□□□□ -2.6
COL17A1Q9UMD9 RNY4P19-201ENST00000362530 96 ntBASIC-1.23□□□□□ -2.61
COL17A1Q9UMD9 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.25□□□□□ -2.61
COL17A1Q9UMD9 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.27□□□□□ -2.61
COL17A1Q9UMD9 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.28□□□□□ -2.61
COL17A1Q9UMD9 RNU6-916P-201ENST00000516088 109 ntBASIC-1.28□□□□□ -2.61
COL17A1Q9UMD9 MIR363-201ENST00000384840 75 ntBASIC-1.41□□□□□ -2.63
COL17A1Q9UMD9 RNY4P13-201ENST00000384284 96 ntBASIC-1.42□□□□□ -2.64
COL17A1Q9UMD9 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.42□□□□□ -2.64
COL17A1Q9UMD9 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.59□□□□□ -2.66
COL17A1Q9UMD9 Y_RNA.15-201ENST00000362420 102 ntBASIC-1.65□□□□□ -2.67
Retrieved 24 of 98,524 protein–RNA pairs in 653.3 ms