Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-133P-201ENST00000383989 107 ntBASIC-4.94□□□□□ -3.2
NUP98P52948 MIR3668-201ENST00000582138 75 ntBASIC-5□□□□□ -3.21
NUP98P52948 SNORD78.1-201ENST00000390866 65 ntBASIC-5.01□□□□□ -3.21
NUP98P52948 RNA5SP225-201ENST00000410874 135 ntBASIC-5.02□□□□□ -3.21
NUP98P52948 Y_RNA.388-201ENST00000383919 113 ntBASIC-5.04□□□□□ -3.22
NUP98P52948 SNORD73B-201ENST00000364394 72 ntBASIC-5.07□□□□□ -3.22
NUP98P52948 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-5.09□□□□□ -3.22
NUP98P52948 RNY4P29-201ENST00000410801 97 ntBASIC-5.1□□□□□ -3.23
NUP98P52948 snosnR66.1-201ENST00000391095 99 ntBASIC-5.13□□□□□ -3.23
NUP98P52948 MIR548T-201ENST00000408369 74 ntBASIC-5.17□□□□□ -3.24
NUP98P52948 MT-TR-201ENST00000387439 65 ntBASIC-5.21□□□□□ -3.24
NUP98P52948 Y_RNA.685-201ENST00000516532 108 ntBASIC-5.27□□□□□ -3.25
NUP98P52948 RNU6-724P-201ENST00000390958 105 ntBASIC-5.32□□□□□ -3.26
NUP98P52948 RNA5SP170-201ENST00000517150 101 ntBASIC-5.37□□□□□ -3.27
NUP98P52948 RNU6-1298P-201ENST00000362456 101 ntBASIC-5.43□□□□□ -3.28
NUP98P52948 MIR1302-4-201ENST00000408701 150 ntBASIC-5.43□□□□□ -3.28
NUP98P52948 MTND4LP19-201ENST00000403051 166 ntBASIC-5.49□□□□□ -3.29
NUP98P52948 AL603908.1-201ENST00000406098 201 ntBASIC-5.6□□□□□ -3.31
NUP98P52948 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-5.63□□□□□ -3.31
NUP98P52948 U2.22-201ENST00000636441 106 ntBASIC-5.74□□□□□ -3.33
NUP98P52948 RNU4-37P-201ENST00000410214 84 ntBASIC-5.96□□□□□ -3.36
NUP98P52948 RNU6-638P-201ENST00000516582 104 ntBASIC-6.15□□□□□ -3.39
NUP98P52948 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-6.26□□□□□ -3.41
NUP98P52948 SNORA72.7-201ENST00000516349 94 ntBASIC-6.46□□□□□ -3.44
Retrieved 24 of 98,524 protein–RNA pairs in 185.5 ms