Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.55□□□□□ -2.66
ZKSCAN3Q9BRR0 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.56□□□□□ -2.66
ZKSCAN3Q9BRR0 MIR1207-201ENST00000408249 87 ntBASIC-1.56□□□□□ -2.66
ZKSCAN3Q9BRR0 SNORD113-3-201ENST00000364830 72 ntBASIC-1.59□□□□□ -2.66
ZKSCAN3Q9BRR0 MIR656-201ENST00000385224 78 ntBASIC-1.59□□□□□ -2.66
ZKSCAN3Q9BRR0 RNY4P27-201ENST00000363341 96 ntBASIC-1.6□□□□□ -2.67
ZKSCAN3Q9BRR0 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.6□□□□□ -2.67
ZKSCAN3Q9BRR0 RNU6-485P-201ENST00000363475 107 ntBASIC-1.61□□□□□ -2.67
ZKSCAN3Q9BRR0 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.61□□□□□ -2.67
ZKSCAN3Q9BRR0 AC097484.2-201ENST00000509147 251 ntBASIC-1.63□□□□□ -2.67
ZKSCAN3Q9BRR0 RNU6-133P-201ENST00000383989 107 ntBASIC-1.64□□□□□ -2.67
ZKSCAN3Q9BRR0 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.64□□□□□ -2.67
ZKSCAN3Q9BRR0 MIR487B-201ENST00000385021 84 ntBASIC-1.67□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.68□□□□□ -2.68
ZKSCAN3Q9BRR0 SNORD18.1-201ENST00000363807 70 ntBASIC-1.69□□□□□ -2.68
ZKSCAN3Q9BRR0 RNU6-983P-201ENST00000516004 103 ntBASIC-1.71□□□□□ -2.68
ZKSCAN3Q9BRR0 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.73□□□□□ -2.69
ZKSCAN3Q9BRR0 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.74□□□□□ -2.69
ZKSCAN3Q9BRR0 AC108019.1-201ENST00000512540 175 ntBASIC-1.74□□□□□ -2.69
ZKSCAN3Q9BRR0 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.75□□□□□ -2.69
ZKSCAN3Q9BRR0 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.75□□□□□ -2.69
ZKSCAN3Q9BRR0 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.79□□□□□ -2.7
ZKSCAN3Q9BRR0 MIR4756-201ENST00000577874 78 ntBASIC-1.8□□□□□ -2.7
ZKSCAN3Q9BRR0 MIR664B-201ENST00000626756 61 ntBASIC-1.8□□□□□ -2.7
ZKSCAN3Q9BRR0 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.82□□□□□ -2.7
ZKSCAN3Q9BRR0 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.84□□□□□ -2.7
ZKSCAN3Q9BRR0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.9□□□□□ -2.71
ZKSCAN3Q9BRR0 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.92□□□□□ -2.72
ZKSCAN3Q9BRR0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
ZKSCAN3Q9BRR0 MIR496-201ENST00000385226 102 ntBASIC-1.94□□□□□ -2.72
ZKSCAN3Q9BRR0 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.94□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.95□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.95□□□□□ -2.72
ZKSCAN3Q9BRR0 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.95□□□□□ -2.72
ZKSCAN3Q9BRR0 RNU6-894P-201ENST00000517094 105 ntBASIC-1.95□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.96□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.96□□□□□ -2.72
ZKSCAN3Q9BRR0 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.97□□□□□ -2.72
ZKSCAN3Q9BRR0 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.97□□□□□ -2.72
ZKSCAN3Q9BRR0 RNA5SP405-201ENST00000363059 114 ntBASIC-1.98□□□□□ -2.73
ZKSCAN3Q9BRR0 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.98□□□□□ -2.73
ZKSCAN3Q9BRR0 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.99□□□□□ -2.73
ZKSCAN3Q9BRR0 RNU6-118P-201ENST00000516552 102 ntBASIC-2.05□□□□□ -2.74
ZKSCAN3Q9BRR0 MIR3139-201ENST00000579145 76 ntBASIC-2.07□□□□□ -2.74
ZKSCAN3Q9BRR0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.08□□□□□ -2.74
ZKSCAN3Q9BRR0 RNU6-854P-201ENST00000364036 107 ntBASIC-2.08□□□□□ -2.74
ZKSCAN3Q9BRR0 MIR4748-201ENST00000578076 82 ntBASIC-2.08□□□□□ -2.74
ZKSCAN3Q9BRR0 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.13□□□□□ -2.75
ZKSCAN3Q9BRR0 RNY4P7-201ENST00000364600 96 ntBASIC-2.14□□□□□ -2.75
ZKSCAN3Q9BRR0 MT-TM-201ENST00000387377 68 ntBASIC-2.15□□□□□ -2.75
ZKSCAN3Q9BRR0 RNU6-422P-201ENST00000384632 107 ntBASIC-2.17□□□□□ -2.76
ZKSCAN3Q9BRR0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.19□□□□□ -2.76
ZKSCAN3Q9BRR0 SNORD54-201ENST00000459159 67 ntBASIC-2.2□□□□□ -2.76
ZKSCAN3Q9BRR0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.2□□□□□ -2.76
ZKSCAN3Q9BRR0 RNA5SP93-201ENST00000362525 114 ntBASIC-2.21□□□□□ -2.76
ZKSCAN3Q9BRR0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.22□□□□□ -2.76
ZKSCAN3Q9BRR0 RNY4P9-201ENST00000363194 97 ntBASIC-2.23□□□□□ -2.77
ZKSCAN3Q9BRR0 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.25□□□□□ -2.77
ZKSCAN3Q9BRR0 RNU6-737P-201ENST00000365370 107 ntBASIC-2.25□□□□□ -2.77
ZKSCAN3Q9BRR0 AL731768.1-201ENST00000603124 139 ntBASIC-2.25□□□□□ -2.77
ZKSCAN3Q9BRR0 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.26□□□□□ -2.77
ZKSCAN3Q9BRR0 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.3□□□□□ -2.78
ZKSCAN3Q9BRR0 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.31□□□□□ -2.78
ZKSCAN3Q9BRR0 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.32□□□□□ -2.78
ZKSCAN3Q9BRR0 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.38□□□□□ -2.79
ZKSCAN3Q9BRR0 RNY4-201ENST00000516507 96 ntBASIC-2.39□□□□□ -2.79
ZKSCAN3Q9BRR0 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.41□□□□□ -2.8
ZKSCAN3Q9BRR0 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.46□□□□□ -2.8
ZKSCAN3Q9BRR0 RNU6-620P-201ENST00000384017 96 ntBASIC-2.46□□□□□ -2.8
ZKSCAN3Q9BRR0 Y_RNA.663-201ENST00000516043 101 ntBASIC-2.46□□□□□ -2.8
ZKSCAN3Q9BRR0 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.47□□□□□ -2.8
ZKSCAN3Q9BRR0 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.48□□□□□ -2.81
ZKSCAN3Q9BRR0 MIR124-1-201ENST00000385275 85 ntBASIC-2.48□□□□□ -2.81
ZKSCAN3Q9BRR0 Y_RNA.137-201ENST00000363455 112 ntBASIC-2.49□□□□□ -2.81
ZKSCAN3Q9BRR0 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.49□□□□□ -2.81
ZKSCAN3Q9BRR0 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.51□□□□□ -2.81
ZKSCAN3Q9BRR0 MIR548T-201ENST00000408369 74 ntBASIC-2.51□□□□□ -2.81
ZKSCAN3Q9BRR0 AL359920.1-201ENST00000618332 176 ntBASIC-2.52□□□□□ -2.81
ZKSCAN3Q9BRR0 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.53□□□□□ -2.81
ZKSCAN3Q9BRR0 RNU6-230P-201ENST00000362457 104 ntBASIC-2.54□□□□□ -2.82
ZKSCAN3Q9BRR0 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.55□□□□□ -2.82
ZKSCAN3Q9BRR0 MIRLET7A3-201ENST00000362116 74 ntBASIC-2.62□□□□□ -2.83
ZKSCAN3Q9BRR0 RNU6-627P-201ENST00000364032 102 ntBASIC-2.63□□□□□ -2.83
ZKSCAN3Q9BRR0 MIR5693-201ENST00000577722 73 ntBASIC-2.63□□□□□ -2.83
ZKSCAN3Q9BRR0 RNY4P25-201ENST00000459254 96 ntBASIC-2.66□□□□□ -2.84
ZKSCAN3Q9BRR0 MIR548AH-201ENST00000637109 76 ntBASIC-2.67□□□□□ -2.84
ZKSCAN3Q9BRR0 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.68□□□□□ -2.84
ZKSCAN3Q9BRR0 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.7□□□□□ -2.84
ZKSCAN3Q9BRR0 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.72□□□□□ -2.84
ZKSCAN3Q9BRR0 SNORD115-45-201ENST00000391078 81 ntBASIC-2.75□□□□□ -2.85
ZKSCAN3Q9BRR0 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2.75□□□□□ -2.85
ZKSCAN3Q9BRR0 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.82□□□□□ -2.86
ZKSCAN3Q9BRR0 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.84□□□□□ -2.86
ZKSCAN3Q9BRR0 SNORD114-13-201ENST00000364377 74 ntBASIC-2.87□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms