Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-230P-201ENST00000362457 104 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.88□□□□□ -2.87
CHMP4CQ96CF2 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 RNU6-912P-201ENST00000363800 104 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.89□□□□□ -2.87
CHMP4CQ96CF2 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.9□□□□□ -2.87
CHMP4CQ96CF2 RNA5SP93-201ENST00000362525 114 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 RNU6-614P-201ENST00000384369 107 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 U6.59-201ENST00000615686 107 ntBASIC-2.91□□□□□ -2.88
CHMP4CQ96CF2 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.92□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNY4P9-201ENST00000363194 97 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNU6-936P-201ENST00000384005 107 ntBASIC-2.93□□□□□ -2.88
CHMP4CQ96CF2 RNU6-822P-201ENST00000362707 106 ntBASIC-2.94□□□□□ -2.88
CHMP4CQ96CF2 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.94□□□□□ -2.88
CHMP4CQ96CF2 SNORD113-3-201ENST00000364830 72 ntBASIC-2.95□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.379-201ENST00000365653 102 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 RNU6-141P-201ENST00000410499 105 ntBASIC-2.96□□□□□ -2.88
CHMP4CQ96CF2 RNY4-201ENST00000516507 96 ntBASIC-2.99□□□□□ -2.89
CHMP4CQ96CF2 RNU6-838P-201ENST00000363399 108 ntBASIC-3□□□□□ -2.89
CHMP4CQ96CF2 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.01□□□□□ -2.89
CHMP4CQ96CF2 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.01□□□□□ -2.89
CHMP4CQ96CF2 RNU6-753P-201ENST00000363926 107 ntBASIC-3.02□□□□□ -2.89
CHMP4CQ96CF2 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.02□□□□□ -2.89
CHMP4CQ96CF2 RNU6-808P-201ENST00000391233 108 ntBASIC-3.04□□□□□ -2.9
CHMP4CQ96CF2 MIR1254-1-201ENST00000408257 97 ntBASIC-3.09□□□□□ -2.9
CHMP4CQ96CF2 MIR548H4-201ENST00000408689 111 ntBASIC-3.09□□□□□ -2.9
CHMP4CQ96CF2 Y_RNA.382-201ENST00000365672 114 ntBASIC-3.1□□□□□ -2.91
CHMP4CQ96CF2 Y_RNA.434-201ENST00000384090 100 ntBASIC-3.11□□□□□ -2.91
CHMP4CQ96CF2 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.13□□□□□ -2.91
CHMP4CQ96CF2 RNU6-345P-201ENST00000517001 107 ntBASIC-3.14□□□□□ -2.91
CHMP4CQ96CF2 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-3.14□□□□□ -2.91
CHMP4CQ96CF2 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.15□□□□□ -2.91
CHMP4CQ96CF2 MTND4LP19-201ENST00000403051 166 ntBASIC-3.17□□□□□ -2.92
CHMP4CQ96CF2 RNU6-930P-201ENST00000390938 100 ntBASIC-3.18□□□□□ -2.92
CHMP4CQ96CF2 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.21□□□□□ -2.92
CHMP4CQ96CF2 SNORD115.2-201ENST00000391126 59 ntBASIC-3.23□□□□□ -2.93
CHMP4CQ96CF2 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.24□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.25□□□□□ -2.93
CHMP4CQ96CF2 MIR5693-201ENST00000577722 73 ntBASIC-3.25□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.63-201ENST00000362841 102 ntBASIC-3.26□□□□□ -2.93
CHMP4CQ96CF2 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.28□□□□□ -2.93
CHMP4CQ96CF2 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.29□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.29□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.31□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.31□□□□□ -2.94
CHMP4CQ96CF2 RNY4P25-201ENST00000459254 96 ntBASIC-3.32□□□□□ -2.94
CHMP4CQ96CF2 MIR548F3-201ENST00000408509 87 ntBASIC-3.33□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.134-201ENST00000363435 105 ntBASIC-3.34□□□□□ -2.94
CHMP4CQ96CF2 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.36□□□□□ -2.95
CHMP4CQ96CF2 RNU6-986P-201ENST00000363133 102 ntBASIC-3.38□□□□□ -2.95
CHMP4CQ96CF2 RNU6-836P-201ENST00000362920 107 ntBASIC-3.39□□□□□ -2.95
CHMP4CQ96CF2 RNA5SP224-201ENST00000365069 126 ntBASIC-3.41□□□□□ -2.96
CHMP4CQ96CF2 AL731768.1-201ENST00000603124 139 ntBASIC-3.41□□□□□ -2.96
CHMP4CQ96CF2 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.43□□□□□ -2.96
CHMP4CQ96CF2 RNU6-803P-201ENST00000516034 102 ntBASIC-3.43□□□□□ -2.96
CHMP4CQ96CF2 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.44□□□□□ -2.96
CHMP4CQ96CF2 RNU6-59P-201ENST00000384787 107 ntBASIC-3.45□□□□□ -2.96
CHMP4CQ96CF2 Y_RNA.658-201ENST00000515990 97 ntBASIC-3.47□□□□□ -2.96
CHMP4CQ96CF2 SNORD45C-201ENST00000383893 79 ntBASIC-3.48□□□□□ -2.97
CHMP4CQ96CF2 DLEU2_4.2-201ENST00000616613 58 ntBASIC-3.48□□□□□ -2.97
CHMP4CQ96CF2 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 MIR545-201ENST00000385085 106 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 MIR656-201ENST00000385224 78 ntBASIC-3.49□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.51□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.51□□□□□ -2.97
CHMP4CQ96CF2 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.54□□□□□ -2.98
CHMP4CQ96CF2 MIR509-1-201ENST00000385265 94 ntBASIC-3.56□□□□□ -2.98
CHMP4CQ96CF2 MIR509-2-201ENST00000390724 91 ntBASIC-3.56□□□□□ -2.98
CHMP4CQ96CF2 RNU6-737P-201ENST00000365370 107 ntBASIC-3.57□□□□□ -2.98
CHMP4CQ96CF2 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.57□□□□□ -2.98
CHMP4CQ96CF2 Y_RNA.652-201ENST00000458902 102 ntBASIC-3.58□□□□□ -2.98
CHMP4CQ96CF2 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.61□□□□□ -2.99
CHMP4CQ96CF2 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.61□□□□□ -2.99
CHMP4CQ96CF2 Y_RNA.663-201ENST00000516043 101 ntBASIC-3.62□□□□□ -2.99
CHMP4CQ96CF2 AL359920.1-201ENST00000618332 176 ntBASIC-3.63□□□□□ -2.99
CHMP4CQ96CF2 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.67□□□□□ -3
CHMP4CQ96CF2 RNU6-987P-201ENST00000384759 104 ntBASIC-3.68□□□□□ -3
CHMP4CQ96CF2 RNU4-37P-201ENST00000410214 84 ntBASIC-3.69□□□□□ -3
CHMP4CQ96CF2 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.71□□□□□ -3
CHMP4CQ96CF2 SNORD114-13-201ENST00000364377 74 ntBASIC-3.72□□□□□ -3
CHMP4CQ96CF2 RNA5SP106-201ENST00000517274 100 ntBASIC-3.72□□□□□ -3
CHMP4CQ96CF2 RNU6-854P-201ENST00000364036 107 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 RNY4P10-201ENST00000365571 96 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 SNORD115-45-201ENST00000391078 81 ntBASIC-3.73□□□□□ -3.01
CHMP4CQ96CF2 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.84□□□□□ -3.02
CHMP4CQ96CF2 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.88□□□□□ -3.03
CHMP4CQ96CF2 MIR124-1-201ENST00000385275 85 ntBASIC-3.89□□□□□ -3.03
CHMP4CQ96CF2 MIR548AH-201ENST00000637109 76 ntBASIC-3.94□□□□□ -3.04
CHMP4CQ96CF2 Y_RNA.137-201ENST00000363455 112 ntBASIC-3.99□□□□□ -3.05
CHMP4CQ96CF2 RNU6-422P-201ENST00000384632 107 ntBASIC-4.05□□□□□ -3.06
CHMP4CQ96CF2 U6.103-201ENST00000637085 61 ntBASIC-4.06□□□□□ -3.06
CHMP4CQ96CF2 RNU6-665P-201ENST00000384639 107 ntBASIC-4.1□□□□□ -3.07
CHMP4CQ96CF2 Y_RNA.406-201ENST00000383984 100 ntBASIC-4.11□□□□□ -3.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms