Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.14□□□□□ -2.59
HERVK_113Q902F9 RNA5SP224-201ENST00000365069 126 ntBASIC-1.15□□□□□ -2.59
HERVK_113Q902F9 SNORD115.2-201ENST00000391126 59 ntBASIC-1.15□□□□□ -2.59
HERVK_113Q902F9 RNU4-37P-201ENST00000410214 84 ntBASIC-1.15□□□□□ -2.59
HERVK_113Q902F9 MIR664B-201ENST00000626756 61 ntBASIC-1.15□□□□□ -2.59
HERVK_113Q902F9 RNU6-987P-201ENST00000384759 104 ntBASIC-1.16□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.17□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.17□□□□□ -2.6
HERVK_113Q902F9 RNU6-141P-201ENST00000410499 105 ntBASIC-1.18□□□□□ -2.6
HERVK_113Q902F9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.18□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.19□□□□□ -2.6
HERVK_113Q902F9 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
HERVK_113Q902F9 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.19□□□□□ -2.6
HERVK_113Q902F9 RNU6-345P-201ENST00000517001 107 ntBASIC-1.19□□□□□ -2.6
HERVK_113Q902F9 MIR1246-201ENST00000636535 73 ntBASIC-1.19□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.2□□□□□ -2.6
HERVK_113Q902F9 RNU6-118P-201ENST00000516552 102 ntBASIC-1.2□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.21□□□□□ -2.6
HERVK_113Q902F9 RNU6-836P-201ENST00000362920 107 ntBASIC-1.21□□□□□ -2.6
HERVK_113Q902F9 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
HERVK_113Q902F9 MIR4441-201ENST00000582623 100 ntBASIC-1.21□□□□□ -2.6
HERVK_113Q902F9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.22□□□□□ -2.6
HERVK_113Q902F9 SNORD45C-201ENST00000383893 79 ntBASIC-1.22□□□□□ -2.6
HERVK_113Q902F9 MIR4748-201ENST00000578076 82 ntBASIC-1.22□□□□□ -2.6
HERVK_113Q902F9 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.23□□□□□ -2.61
HERVK_113Q902F9 RNA5SP405-201ENST00000363059 114 ntBASIC-1.24□□□□□ -2.61
HERVK_113Q902F9 RNU6-854P-201ENST00000364036 107 ntBASIC-1.26□□□□□ -2.61
HERVK_113Q902F9 MIR656-201ENST00000385224 78 ntBASIC-1.26□□□□□ -2.61
HERVK_113Q902F9 RNU6-194P-201ENST00000363862 105 ntBASIC-1.27□□□□□ -2.61
HERVK_113Q902F9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.3□□□□□ -2.62
HERVK_113Q902F9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.3□□□□□ -2.62
HERVK_113Q902F9 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.31□□□□□ -2.62
HERVK_113Q902F9 RNY4P27-201ENST00000363341 96 ntBASIC-1.33□□□□□ -2.62
HERVK_113Q902F9 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.33□□□□□ -2.62
HERVK_113Q902F9 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.34□□□□□ -2.62
HERVK_113Q902F9 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.35□□□□□ -2.63
HERVK_113Q902F9 MIR3139-201ENST00000579145 76 ntBASIC-1.35□□□□□ -2.63
HERVK_113Q902F9 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.36□□□□□ -2.63
HERVK_113Q902F9 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.36□□□□□ -2.63
HERVK_113Q902F9 SNORD111B-201ENST00000408587 80 ntBASIC-1.36□□□□□ -2.63
HERVK_113Q902F9 AL731768.1-201ENST00000603124 139 ntBASIC-1.37□□□□□ -2.63
HERVK_113Q902F9 RNU6-737P-201ENST00000365370 107 ntBASIC-1.38□□□□□ -2.63
HERVK_113Q902F9 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.38□□□□□ -2.63
HERVK_113Q902F9 RNY4P9-201ENST00000363194 97 ntBASIC-1.39□□□□□ -2.63
HERVK_113Q902F9 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.39□□□□□ -2.63
HERVK_113Q902F9 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.4□□□□□ -2.63
HERVK_113Q902F9 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.4□□□□□ -2.63
HERVK_113Q902F9 U6.103-201ENST00000637085 61 ntBASIC-1.4□□□□□ -2.63
HERVK_113Q902F9 MIR124-1-201ENST00000385275 85 ntBASIC-1.41□□□□□ -2.64
HERVK_113Q902F9 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.41□□□□□ -2.64
HERVK_113Q902F9 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.42□□□□□ -2.64
HERVK_113Q902F9 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.42□□□□□ -2.64
HERVK_113Q902F9 MT-TM-201ENST00000387377 68 ntBASIC-1.43□□□□□ -2.64
HERVK_113Q902F9 RNU6-485P-201ENST00000363475 107 ntBASIC-1.47□□□□□ -2.64
HERVK_113Q902F9 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.47□□□□□ -2.64
HERVK_113Q902F9 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.47□□□□□ -2.64
HERVK_113Q902F9 RNU6-724P-201ENST00000390958 105 ntBASIC-1.47□□□□□ -2.64
HERVK_113Q902F9 Y_RNA.663-201ENST00000516043 101 ntBASIC-1.47□□□□□ -2.64
HERVK_113Q902F9 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.48□□□□□ -2.65
HERVK_113Q902F9 MIR548AH-201ENST00000637109 76 ntBASIC-1.49□□□□□ -2.65
HERVK_113Q902F9 SNORD115-45-201ENST00000391078 81 ntBASIC-1.5□□□□□ -2.65
HERVK_113Q902F9 MIR5693-201ENST00000577722 73 ntBASIC-1.5□□□□□ -2.65
HERVK_113Q902F9 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.52□□□□□ -2.65
HERVK_113Q902F9 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.52□□□□□ -2.65
HERVK_113Q902F9 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.53□□□□□ -2.65
HERVK_113Q902F9 AL359920.1-201ENST00000618332 176 ntBASIC-1.53□□□□□ -2.65
HERVK_113Q902F9 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.54□□□□□ -2.66
HERVK_113Q902F9 Y_RNA.397-201ENST00000383950 98 ntBASIC-1.55□□□□□ -2.66
HERVK_113Q902F9 RNU6-422P-201ENST00000384632 107 ntBASIC-1.55□□□□□ -2.66
HERVK_113Q902F9 RNY4P25-201ENST00000459254 96 ntBASIC-1.55□□□□□ -2.66
HERVK_113Q902F9 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.56□□□□□ -2.66
HERVK_113Q902F9 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.57□□□□□ -2.66
HERVK_113Q902F9 RNU6-230P-201ENST00000362457 104 ntBASIC-1.6□□□□□ -2.67
HERVK_113Q902F9 RNU6-1091P-201ENST00000363945 107 ntBASIC-1.6□□□□□ -2.67
HERVK_113Q902F9 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.6□□□□□ -2.67
HERVK_113Q902F9 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.61□□□□□ -2.67
HERVK_113Q902F9 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.65□□□□□ -2.67
HERVK_113Q902F9 MIR496-201ENST00000385226 102 ntBASIC-1.66□□□□□ -2.68
HERVK_113Q902F9 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.67□□□□□ -2.68
HERVK_113Q902F9 SNORD114-13-201ENST00000364377 74 ntBASIC-1.67□□□□□ -2.68
HERVK_113Q902F9 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.67□□□□□ -2.68
HERVK_113Q902F9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-1.67□□□□□ -2.68
HERVK_113Q902F9 RNY4P7-201ENST00000364600 96 ntBASIC-1.69□□□□□ -2.68
HERVK_113Q902F9 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.71□□□□□ -2.68
HERVK_113Q902F9 RNU6-133P-201ENST00000383989 107 ntBASIC-1.73□□□□□ -2.69
HERVK_113Q902F9 RNU6-620P-201ENST00000384017 96 ntBASIC-1.75□□□□□ -2.69
HERVK_113Q902F9 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.75□□□□□ -2.69
HERVK_113Q902F9 RNU6-119P-201ENST00000364882 107 ntBASIC-1.77□□□□□ -2.69
HERVK_113Q902F9 RNU6-894P-201ENST00000517094 105 ntBASIC-1.77□□□□□ -2.69
HERVK_113Q902F9 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.8□□□□□ -2.7
HERVK_113Q902F9 RNA5SP93-201ENST00000362525 114 ntBASIC-1.84□□□□□ -2.7
HERVK_113Q902F9 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.85□□□□□ -2.71
HERVK_113Q902F9 SNORD54-201ENST00000459159 67 ntBASIC-1.86□□□□□ -2.71
HERVK_113Q902F9 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.88□□□□□ -2.71
HERVK_113Q902F9 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.88□□□□□ -2.71
HERVK_113Q902F9 RNA5SP449-201ENST00000516871 130 ntBASIC-1.89□□□□□ -2.71
HERVK_113Q902F9 MIR548T-201ENST00000408369 74 ntBASIC-1.9□□□□□ -2.71
HERVK_113Q902F9 RNU6-627P-201ENST00000364032 102 ntBASIC-1.92□□□□□ -2.72
HERVK_113Q902F9 MIR509-1-201ENST00000385265 94 ntBASIC-1.93□□□□□ -2.72
HERVK_113Q902F9 MIR509-2-201ENST00000390724 91 ntBASIC-1.93□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 289 ms