Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.44□□□□□ -2.48
USP43Q70EL4 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.44□□□□□ -2.48
USP43Q70EL4 AC097484.2-201ENST00000509147 251 ntBASIC-0.45□□□□□ -2.48
USP43Q70EL4 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.45□□□□□ -2.48
USP43Q70EL4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.45□□□□□ -2.48
USP43Q70EL4 MIR365A-201ENST00000362260 87 ntBASIC-0.46□□□□□ -2.48
USP43Q70EL4 MIR487B-201ENST00000385021 84 ntBASIC-0.47□□□□□ -2.48
USP43Q70EL4 SNORD83B-201ENST00000386745 93 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 MIR1285-2-201ENST00000408311 88 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 MIR4441-201ENST00000582623 100 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.48□□□□□ -2.49
USP43Q70EL4 RNA5SP86-201ENST00000390869 98 ntBASIC-0.49□□□□□ -2.49
USP43Q70EL4 RNU6-983P-201ENST00000516004 103 ntBASIC-0.5□□□□□ -2.49
USP43Q70EL4 RNU6-1043P-201ENST00000410355 99 ntBASIC-0.51□□□□□ -2.49
USP43Q70EL4 MIR4520-1-201ENST00000582609 70 ntBASIC-0.51□□□□□ -2.49
USP43Q70EL4 RNU6-1024P-201ENST00000384199 107 ntBASIC-0.52□□□□□ -2.49
USP43Q70EL4 MIR4306-201ENST00000583390 91 ntBASIC-0.52□□□□□ -2.49
USP43Q70EL4 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.54□□□□□ -2.5
USP43Q70EL4 MIR1246-201ENST00000636535 73 ntBASIC-0.54□□□□□ -2.5
USP43Q70EL4 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.55□□□□□ -2.5
USP43Q70EL4 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.55□□□□□ -2.5
USP43Q70EL4 MIR3165-201ENST00000579874 75 ntBASIC-0.55□□□□□ -2.5
USP43Q70EL4 RNU6-226P-201ENST00000363778 107 ntBASIC-0.56□□□□□ -2.5
USP43Q70EL4 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.58□□□□□ -2.5
USP43Q70EL4 MIR124-1-201ENST00000385275 85 ntBASIC-0.58□□□□□ -2.5
USP43Q70EL4 RNU6-620P-201ENST00000384017 96 ntBASIC-0.59□□□□□ -2.5
USP43Q70EL4 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.59□□□□□ -2.5
USP43Q70EL4 MIR496-201ENST00000385226 102 ntBASIC-0.6□□□□□ -2.51
USP43Q70EL4 MIR5591-201ENST00000578248 65 ntBASIC-0.6□□□□□ -2.51
USP43Q70EL4 MIR4756-201ENST00000577874 78 ntBASIC-0.61□□□□□ -2.51
USP43Q70EL4 MIR4770-201ENST00000579149 58 ntBASIC-0.61□□□□□ -2.51
USP43Q70EL4 AC108019.1-201ENST00000512540 175 ntBASIC-0.62□□□□□ -2.51
USP43Q70EL4 RNU6-706P-201ENST00000517229 104 ntBASIC-0.62□□□□□ -2.51
USP43Q70EL4 RNU6-422P-201ENST00000384632 107 ntBASIC-0.63□□□□□ -2.51
USP43Q70EL4 RNU6-737P-201ENST00000365370 107 ntBASIC-0.64□□□□□ -2.51
USP43Q70EL4 MIR4748-201ENST00000578076 82 ntBASIC-0.64□□□□□ -2.51
USP43Q70EL4 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.65□□□□□ -2.51
USP43Q70EL4 AL731768.1-201ENST00000603124 139 ntBASIC-0.65□□□□□ -2.51
USP43Q70EL4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
USP43Q70EL4 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.66□□□□□ -2.52
USP43Q70EL4 MIR548AH-201ENST00000637109 76 ntBASIC-0.66□□□□□ -2.52
USP43Q70EL4 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.67□□□□□ -2.52
USP43Q70EL4 RNY4P7-201ENST00000364600 96 ntBASIC-0.67□□□□□ -2.52
USP43Q70EL4 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.67□□□□□ -2.52
USP43Q70EL4 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.67□□□□□ -2.52
USP43Q70EL4 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.68□□□□□ -2.52
USP43Q70EL4 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.69□□□□□ -2.52
USP43Q70EL4 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.69□□□□□ -2.52
USP43Q70EL4 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.69□□□□□ -2.52
USP43Q70EL4 HLA-S-202ENST00000425174 53 ntBASIC-0.69□□□□□ -2.52
USP43Q70EL4 RNA5SP93-201ENST00000362525 114 ntBASIC-0.71□□□□□ -2.52
USP43Q70EL4 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.71□□□□□ -2.52
USP43Q70EL4 MIR664B-201ENST00000626756 61 ntBASIC-0.72□□□□□ -2.52
USP43Q70EL4 SNORD18.1-201ENST00000363807 70 ntBASIC-0.74□□□□□ -2.53
USP43Q70EL4 RNU6-119P-201ENST00000364882 107 ntBASIC-0.74□□□□□ -2.53
USP43Q70EL4 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.74□□□□□ -2.53
USP43Q70EL4 RNU6-118P-201ENST00000516552 102 ntBASIC-0.75□□□□□ -2.53
USP43Q70EL4 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.76□□□□□ -2.53
USP43Q70EL4 SNORD115-45-201ENST00000391078 81 ntBASIC-0.76□□□□□ -2.53
USP43Q70EL4 RNY4-201ENST00000516507 96 ntBASIC-0.76□□□□□ -2.53
USP43Q70EL4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
USP43Q70EL4 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.77□□□□□ -2.53
USP43Q70EL4 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.77□□□□□ -2.53
USP43Q70EL4 AL359920.1-201ENST00000618332 176 ntBASIC-0.78□□□□□ -2.53
USP43Q70EL4 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.79□□□□□ -2.54
USP43Q70EL4 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.79□□□□□ -2.54
USP43Q70EL4 SNORD54-201ENST00000459159 67 ntBASIC-0.81□□□□□ -2.54
USP43Q70EL4 RNA5SP405-201ENST00000363059 114 ntBASIC-0.82□□□□□ -2.54
USP43Q70EL4 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.82□□□□□ -2.54
USP43Q70EL4 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.83□□□□□ -2.54
USP43Q70EL4 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.83□□□□□ -2.54
USP43Q70EL4 RNY4P9-201ENST00000363194 97 ntBASIC-0.84□□□□□ -2.54
USP43Q70EL4 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.84□□□□□ -2.54
USP43Q70EL4 RNU6-627P-201ENST00000364032 102 ntBASIC-0.84□□□□□ -2.54
USP43Q70EL4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.84□□□□□ -2.54
USP43Q70EL4 MIRLET7A3-201ENST00000362116 74 ntBASIC-0.86□□□□□ -2.55
USP43Q70EL4 RNU6-194P-201ENST00000363862 105 ntBASIC-0.87□□□□□ -2.55
USP43Q70EL4 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.87□□□□□ -2.55
USP43Q70EL4 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.9□□□□□ -2.55
USP43Q70EL4 MIR3139-201ENST00000579145 76 ntBASIC-0.9□□□□□ -2.55
USP43Q70EL4 MIR5693-201ENST00000577722 73 ntBASIC-0.93□□□□□ -2.56
USP43Q70EL4 RNY4P25-201ENST00000459254 96 ntBASIC-0.94□□□□□ -2.56
USP43Q70EL4 MT-TM-201ENST00000387377 68 ntBASIC-0.95□□□□□ -2.56
USP43Q70EL4 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.95□□□□□ -2.56
USP43Q70EL4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.95□□□□□ -2.56
USP43Q70EL4 SNORD114-13-201ENST00000364377 74 ntBASIC-0.96□□□□□ -2.56
USP43Q70EL4 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.98□□□□□ -2.57
USP43Q70EL4 RNU6-892P-201ENST00000410335 99 ntBASIC-0.98□□□□□ -2.57
USP43Q70EL4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.98□□□□□ -2.57
USP43Q70EL4 RNU4-85P-201ENST00000364675 123 ntBASIC-1.02□□□□□ -2.57
USP43Q70EL4 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.03□□□□□ -2.57
USP43Q70EL4 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.03□□□□□ -2.57
USP43Q70EL4 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.04□□□□□ -2.58
USP43Q70EL4 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-1.05□□□□□ -2.58
USP43Q70EL4 RNU6-230P-201ENST00000362457 104 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms