Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORD18.1-201ENST00000363807 70 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR1254-1-201ENST00000408257 97 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 AC108019.1-201ENST00000512540 175 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR4770-201ENST00000579149 58 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 MIR548AM-201ENST00000584298 74 ntBASIC-0.69□□□□□ -2.52
RFX1P22670 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 RNU6-983P-201ENST00000516004 103 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 AC138207.3-201ENST00000585289 166 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 SNORD19B.1-201ENST00000630615 80 ntBASIC-0.7□□□□□ -2.52
RFX1P22670 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.71□□□□□ -2.52
RFX1P22670 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.71□□□□□ -2.52
RFX1P22670 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.72□□□□□ -2.52
RFX1P22670 SNORD113-3-201ENST00000364830 72 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6-841P-201ENST00000383872 107 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNU6ATAC14P-201ENST00000516218 91 ntBASIC-0.73□□□□□ -2.53
RFX1P22670 RNY4-201ENST00000516507 96 ntBASIC-0.74□□□□□ -2.53
RFX1P22670 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 SNORD115.2-201ENST00000391126 59 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.75□□□□□ -2.53
RFX1P22670 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.76□□□□□ -2.53
RFX1P22670 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 SNORD54-201ENST00000459159 67 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.77□□□□□ -2.53
RFX1P22670 RNU6-194P-201ENST00000363862 105 ntBASIC-0.78□□□□□ -2.53
RFX1P22670 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.78□□□□□ -2.53
RFX1P22670 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 RNU6-1306P-201ENST00000365219 99 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.79□□□□□ -2.54
RFX1P22670 AC097484.2-201ENST00000509147 251 ntBASIC-0.8□□□□□ -2.54
RFX1P22670 MIR3139-201ENST00000579145 76 ntBASIC-0.8□□□□□ -2.54
RFX1P22670 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
RFX1P22670 MIR664B-201ENST00000626756 61 ntBASIC-0.81□□□□□ -2.54
RFX1P22670 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.81□□□□□ -2.54
RFX1P22670 MT-TM-201ENST00000387377 68 ntBASIC-0.82□□□□□ -2.54
RFX1P22670 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.83□□□□□ -2.54
RFX1P22670 FTX_4.1-201ENST00000616291 147 ntBASIC-0.83□□□□□ -2.54
RFX1P22670 RNA5SP405-201ENST00000363059 114 ntBASIC-0.84□□□□□ -2.54
RFX1P22670 SNORD111B-201ENST00000408587 80 ntBASIC-0.86□□□□□ -2.55
RFX1P22670 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
RFX1P22670 RNU6-836P-201ENST00000362920 107 ntBASIC-0.87□□□□□ -2.55
RFX1P22670 RNA5SP224-201ENST00000365069 126 ntBASIC-0.88□□□□□ -2.55
RFX1P22670 RNU6-737P-201ENST00000365370 107 ntBASIC-0.88□□□□□ -2.55
RFX1P22670 Y_RNA.186-201ENST00000363899 92 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.9□□□□□ -2.55
RFX1P22670 RNY4P9-201ENST00000363194 97 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 SNORD45C-201ENST00000383893 79 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 RNU6-345P-201ENST00000517001 107 ntBASIC-0.91□□□□□ -2.56
RFX1P22670 TARS-215ENST00000626210 201 ntTSL 5 BASIC-0.91□□□□□ -2.56
RFX1P22670 RNU6-230P-201ENST00000362457 104 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 RNU6-1121P-201ENST00000516802 109 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 MIR4748-201ENST00000578076 82 ntBASIC-0.92□□□□□ -2.56
RFX1P22670 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.93□□□□□ -2.56
RFX1P22670 RNU6-485P-201ENST00000363475 107 ntBASIC-0.95□□□□□ -2.56
RFX1P22670 Y_RNA.79-201ENST00000362992 113 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.96□□□□□ -2.56
RFX1P22670 RNU6-854P-201ENST00000364036 107 ntBASIC-0.97□□□□□ -2.56
RFX1P22670 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 MIR656-201ENST00000385224 78 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 SNORD115-45-201ENST00000391078 81 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 MIR5693-201ENST00000577722 73 ntBASIC-0.98□□□□□ -2.57
RFX1P22670 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.99□□□□□ -2.57
RFX1P22670 Y_RNA.663-201ENST00000516043 101 ntBASIC-0.99□□□□□ -2.57
RFX1P22670 MIR124-1-201ENST00000385275 85 ntBASIC-1□□□□□ -2.57
RFX1P22670 Y_RNA.652-201ENST00000458902 102 ntBASIC-1□□□□□ -2.57
RFX1P22670 RNY4P25-201ENST00000459254 96 ntBASIC-1□□□□□ -2.57
RFX1P22670 AL731768.1-201ENST00000603124 139 ntBASIC-1□□□□□ -2.57
RFX1P22670 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.01□□□□□ -2.57
RFX1P22670 Y_RNA.335-201ENST00000365299 96 ntBASIC-1.01□□□□□ -2.57
RFX1P22670 RNU6-422P-201ENST00000384632 107 ntBASIC-1.02□□□□□ -2.57
RFX1P22670 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 RNU6-803P-201ENST00000516034 102 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 MIR548AH-201ENST00000637109 76 ntBASIC-1.03□□□□□ -2.57
RFX1P22670 RNU6-133P-201ENST00000383989 107 ntBASIC-1.04□□□□□ -2.58
RFX1P22670 RNU6-1161P-201ENST00000516176 102 ntBASIC-1.06□□□□□ -2.58
RFX1P22670 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.08□□□□□ -2.58
RFX1P22670 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.09□□□□□ -2.58
RFX1P22670 Y_RNA.406-201ENST00000383984 100 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 AL359920.1-201ENST00000618332 176 ntBASIC-1.1□□□□□ -2.59
RFX1P22670 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.12□□□□□ -2.59
RFX1P22670 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.14□□□□□ -2.59
RFX1P22670 Y_RNA.137-201ENST00000363455 112 ntBASIC-1.15□□□□□ -2.59
RFX1P22670 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.17□□□□□ -2.6
RFX1P22670 MIR509-1-201ENST00000385265 94 ntBASIC-1.18□□□□□ -2.6
RFX1P22670 MIR509-2-201ENST00000390724 91 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms