Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 MIR633-201ENST00000384821 98 ntBASIC-1.18□□□□□ -2.6
LIMA1Q9UHB6 RNU6-419P-201ENST00000517030 63 ntBASIC-1.18□□□□□ -2.6
LIMA1Q9UHB6 AC013734.1-201ENST00000619329 111 ntBASIC-1.18□□□□□ -2.6
LIMA1Q9UHB6 AL451105.1-201ENST00000450005 189 ntBASIC-1.19□□□□□ -2.6
LIMA1Q9UHB6 RNU6-829P-201ENST00000363700 112 ntBASIC-1.2□□□□□ -2.6
LIMA1Q9UHB6 SNORD113-4-201ENST00000364802 75 ntBASIC-1.2□□□□□ -2.6
LIMA1Q9UHB6 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.2□□□□□ -2.6
LIMA1Q9UHB6 MIR6502-201ENST00000617296 76 ntBASIC-1.21□□□□□ -2.6
LIMA1Q9UHB6 RNU6-1312P-201ENST00000362425 108 ntBASIC-1.22□□□□□ -2.6
LIMA1Q9UHB6 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.22□□□□□ -2.6
LIMA1Q9UHB6 RNU6-400P-201ENST00000391173 106 ntBASIC-1.22□□□□□ -2.6
LIMA1Q9UHB6 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.23□□□□□ -2.61
LIMA1Q9UHB6 AC138207.3-201ENST00000585289 166 ntBASIC-1.23□□□□□ -2.61
LIMA1Q9UHB6 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.23□□□□□ -2.61
LIMA1Q9UHB6 MIR5591-201ENST00000578248 65 ntBASIC-1.24□□□□□ -2.61
LIMA1Q9UHB6 RNU6-530P-201ENST00000391180 107 ntBASIC-1.25□□□□□ -2.61
LIMA1Q9UHB6 MIR202-201ENST00000362219 110 ntBASIC-1.26□□□□□ -2.61
LIMA1Q9UHB6 MIR496-201ENST00000385226 102 ntBASIC-1.26□□□□□ -2.61
LIMA1Q9UHB6 AC079150.2-201ENST00000443733 78 ntBASIC-1.26□□□□□ -2.61
LIMA1Q9UHB6 MIR548X-201ENST00000580069 75 ntBASIC-1.26□□□□□ -2.61
LIMA1Q9UHB6 SNORD45.2-201ENST00000363552 72 ntBASIC-1.29□□□□□ -2.62
LIMA1Q9UHB6 RNU6-361P-201ENST00000364454 107 ntBASIC-1.29□□□□□ -2.62
LIMA1Q9UHB6 RNU6-983P-201ENST00000516004 103 ntBASIC-1.29□□□□□ -2.62
LIMA1Q9UHB6 U6.97-201ENST00000636904 101 ntBASIC-1.29□□□□□ -2.62
LIMA1Q9UHB6 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.3□□□□□ -2.62
LIMA1Q9UHB6 MIR581-201ENST00000384895 96 ntBASIC-1.31□□□□□ -2.62
LIMA1Q9UHB6 MIR4520-1-201ENST00000582609 70 ntBASIC-1.31□□□□□ -2.62
LIMA1Q9UHB6 RNU6-119P-201ENST00000364882 107 ntBASIC-1.32□□□□□ -2.62
LIMA1Q9UHB6 MIR548N-201ENST00000408742 75 ntBASIC-1.32□□□□□ -2.62
LIMA1Q9UHB6 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
LIMA1Q9UHB6 SNORA17.4-201ENST00000391287 132 ntBASIC-1.33□□□□□ -2.62
LIMA1Q9UHB6 SNORD60-201ENST00000383903 83 ntBASIC-1.34□□□□□ -2.62
LIMA1Q9UHB6 MIR4770-201ENST00000579149 58 ntBASIC-1.34□□□□□ -2.62
LIMA1Q9UHB6 MIR4426-201ENST00000640330 63 ntBASIC-1.34□□□□□ -2.62
LIMA1Q9UHB6 RNU6-742P-201ENST00000365289 107 ntBASIC-1.35□□□□□ -2.63
LIMA1Q9UHB6 RNU6-499P-201ENST00000365615 107 ntBASIC-1.35□□□□□ -2.63
LIMA1Q9UHB6 RNU6-788P-201ENST00000390967 104 ntBASIC-1.35□□□□□ -2.63
LIMA1Q9UHB6 RNU6-980P-201ENST00000516925 103 ntBASIC-1.35□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.35□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.36□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.36□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.37□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.38□□□□□ -2.63
LIMA1Q9UHB6 SNORD18C-201ENST00000362704 69 ntBASIC-1.39□□□□□ -2.63
LIMA1Q9UHB6 RNY4P7-201ENST00000364600 96 ntBASIC-1.39□□□□□ -2.63
LIMA1Q9UHB6 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.39□□□□□ -2.63
LIMA1Q9UHB6 MIR3123-201ENST00000583417 75 ntBASIC-1.39□□□□□ -2.63
LIMA1Q9UHB6 RNU4-33P-201ENST00000364316 85 ntBASIC-1.4□□□□□ -2.63
LIMA1Q9UHB6 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.41□□□□□ -2.64
LIMA1Q9UHB6 RNA5SP86-201ENST00000390869 98 ntBASIC-1.42□□□□□ -2.64
LIMA1Q9UHB6 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.42□□□□□ -2.64
LIMA1Q9UHB6 RNU6-300P-201ENST00000459080 104 ntBASIC-1.43□□□□□ -2.64
LIMA1Q9UHB6 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.43□□□□□ -2.64
LIMA1Q9UHB6 RNU6-118P-201ENST00000516552 102 ntBASIC-1.43□□□□□ -2.64
LIMA1Q9UHB6 RNA5SP93-201ENST00000362525 114 ntBASIC-1.44□□□□□ -2.64
LIMA1Q9UHB6 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.44□□□□□ -2.64
LIMA1Q9UHB6 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.44□□□□□ -2.64
LIMA1Q9UHB6 RNU6-68P-201ENST00000516576 104 ntBASIC-1.44□□□□□ -2.64
LIMA1Q9UHB6 SNORD18.1-201ENST00000363807 70 ntBASIC-1.45□□□□□ -2.64
LIMA1Q9UHB6 RNU6-841P-201ENST00000383872 107 ntBASIC-1.46□□□□□ -2.64
LIMA1Q9UHB6 MIR487B-201ENST00000385021 84 ntBASIC-1.46□□□□□ -2.64
LIMA1Q9UHB6 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.48□□□□□ -2.65
LIMA1Q9UHB6 MIR548H1-201ENST00000408610 102 ntBASIC-1.49□□□□□ -2.65
LIMA1Q9UHB6 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.49□□□□□ -2.65
LIMA1Q9UHB6 SNORD54-201ENST00000459159 67 ntBASIC-1.5□□□□□ -2.65
LIMA1Q9UHB6 RNU6-176P-201ENST00000517196 105 ntBASIC-1.5□□□□□ -2.65
LIMA1Q9UHB6 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.51□□□□□ -2.65
LIMA1Q9UHB6 MIR548W-201ENST00000581970 74 ntBASIC-1.52□□□□□ -2.65
LIMA1Q9UHB6 MIR548AM-201ENST00000584298 74 ntBASIC-1.52□□□□□ -2.65
LIMA1Q9UHB6 MIR548AL-201ENST00000578416 97 ntBASIC-1.53□□□□□ -2.65
LIMA1Q9UHB6 snoU13.10-201ENST00000459301 103 ntBASIC-1.54□□□□□ -2.66
LIMA1Q9UHB6 MIR379-201ENST00000362218 67 ntBASIC-1.55□□□□□ -2.66
LIMA1Q9UHB6 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.55□□□□□ -2.66
LIMA1Q9UHB6 RNU6-936P-201ENST00000384005 107 ntBASIC-1.55□□□□□ -2.66
LIMA1Q9UHB6 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.55□□□□□ -2.66
LIMA1Q9UHB6 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.56□□□□□ -2.66
LIMA1Q9UHB6 MIR548H4-201ENST00000408689 111 ntBASIC-1.56□□□□□ -2.66
LIMA1Q9UHB6 RNY4-201ENST00000516507 96 ntBASIC-1.56□□□□□ -2.66
LIMA1Q9UHB6 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.56□□□□□ -2.66
LIMA1Q9UHB6 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.57□□□□□ -2.66
LIMA1Q9UHB6 RNU6-614P-201ENST00000384369 107 ntBASIC-1.58□□□□□ -2.66
LIMA1Q9UHB6 U6.59-201ENST00000615686 107 ntBASIC-1.58□□□□□ -2.66
LIMA1Q9UHB6 RNU6-838P-201ENST00000363399 108 ntBASIC-1.6□□□□□ -2.67
LIMA1Q9UHB6 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.6□□□□□ -2.67
LIMA1Q9UHB6 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.6□□□□□ -2.67
LIMA1Q9UHB6 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.6□□□□□ -2.67
LIMA1Q9UHB6 RNU6-912P-201ENST00000363800 104 ntBASIC-1.61□□□□□ -2.67
LIMA1Q9UHB6 RNU6-753P-201ENST00000363926 107 ntBASIC-1.61□□□□□ -2.67
LIMA1Q9UHB6 MIR3139-201ENST00000579145 76 ntBASIC-1.61□□□□□ -2.67
LIMA1Q9UHB6 AC108019.1-201ENST00000512540 175 ntBASIC-1.64□□□□□ -2.67
LIMA1Q9UHB6 MIR4317-201ENST00000637586 65 ntBASIC-1.64□□□□□ -2.67
LIMA1Q9UHB6 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.65□□□□□ -2.67
LIMA1Q9UHB6 RNU4-88P-201ENST00000411220 86 ntBASIC-1.65□□□□□ -2.67
LIMA1Q9UHB6 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.66□□□□□ -2.68
LIMA1Q9UHB6 MTND4LP19-201ENST00000403051 166 ntBASIC-1.67□□□□□ -2.68
LIMA1Q9UHB6 MIR4756-201ENST00000577874 78 ntBASIC-1.67□□□□□ -2.68
LIMA1Q9UHB6 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.68□□□□□ -2.68
LIMA1Q9UHB6 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.68□□□□□ -2.68
LIMA1Q9UHB6 MT-TM-201ENST00000387377 68 ntBASIC-1.68□□□□□ -2.68
LIMA1Q9UHB6 RNU6-808P-201ENST00000391233 108 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms