Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU6-753P-201ENST00000363926 107 ntBASIC-1.25□□□□□ -2.61
ERCC4Q92889 SNORD60-201ENST00000383903 83 ntBASIC-1.26□□□□□ -2.61
ERCC4Q92889 RNU6-987P-201ENST00000384759 104 ntBASIC-1.26□□□□□ -2.61
ERCC4Q92889 MIR548N-201ENST00000408742 75 ntBASIC-1.26□□□□□ -2.61
ERCC4Q92889 RNU4-37P-201ENST00000410214 84 ntBASIC-1.27□□□□□ -2.61
ERCC4Q92889 RNU6-838P-201ENST00000363399 108 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 MIR548AL-201ENST00000578416 97 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.28□□□□□ -2.61
ERCC4Q92889 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
ERCC4Q92889 MIR6874-201ENST00000635894 71 ntBASIC-1.29□□□□□ -2.62
ERCC4Q92889 RNU6-141P-201ENST00000410499 105 ntBASIC-1.32□□□□□ -2.62
ERCC4Q92889 MIR3165-201ENST00000579874 75 ntBASIC-1.32□□□□□ -2.62
ERCC4Q92889 RNU6-400P-201ENST00000391173 106 ntBASIC-1.33□□□□□ -2.62
ERCC4Q92889 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.34□□□□□ -2.62
ERCC4Q92889 MIR581-201ENST00000384895 96 ntBASIC-1.34□□□□□ -2.62
ERCC4Q92889 RNU6-176P-201ENST00000517196 105 ntBASIC-1.34□□□□□ -2.62
ERCC4Q92889 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.35□□□□□ -2.63
ERCC4Q92889 RNU6-300P-201ENST00000459080 104 ntBASIC-1.35□□□□□ -2.63
ERCC4Q92889 MIR1207-201ENST00000408249 87 ntBASIC-1.36□□□□□ -2.63
ERCC4Q92889 MIR365A-201ENST00000362260 87 ntBASIC-1.37□□□□□ -2.63
ERCC4Q92889 SNORD114-3-201ENST00000364969 75 ntBASIC-1.37□□□□□ -2.63
ERCC4Q92889 U6.97-201ENST00000636904 101 ntBASIC-1.37□□□□□ -2.63
ERCC4Q92889 SNORD18C-201ENST00000362704 69 ntBASIC-1.38□□□□□ -2.63
ERCC4Q92889 MIR548F3-201ENST00000408509 87 ntBASIC-1.38□□□□□ -2.63
ERCC4Q92889 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.39□□□□□ -2.63
ERCC4Q92889 RNU6-930P-201ENST00000390938 100 ntBASIC-1.39□□□□□ -2.63
ERCC4Q92889 MIR1285-2-201ENST00000408311 88 ntBASIC-1.39□□□□□ -2.63
ERCC4Q92889 RNU4-88P-201ENST00000411220 86 ntBASIC-1.39□□□□□ -2.63
ERCC4Q92889 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
ERCC4Q92889 MIR548H4-201ENST00000408689 111 ntBASIC-1.42□□□□□ -2.64
ERCC4Q92889 MIR6502-201ENST00000617296 76 ntBASIC-1.42□□□□□ -2.64
ERCC4Q92889 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.43□□□□□ -2.64
ERCC4Q92889 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.43□□□□□ -2.64
ERCC4Q92889 MIR8485-201ENST00000401372 91 ntBASIC-1.44□□□□□ -2.64
ERCC4Q92889 RNA5SP180-201ENST00000516181 101 ntBASIC-1.44□□□□□ -2.64
ERCC4Q92889 MIR4441-201ENST00000582623 100 ntBASIC-1.44□□□□□ -2.64
ERCC4Q92889 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.46□□□□□ -2.64
ERCC4Q92889 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.47□□□□□ -2.64
ERCC4Q92889 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.47□□□□□ -2.64
ERCC4Q92889 RNU6-68P-201ENST00000516576 104 ntBASIC-1.47□□□□□ -2.64
ERCC4Q92889 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.47□□□□□ -2.64
ERCC4Q92889 RNU6-695P-201ENST00000391157 104 ntBASIC-1.48□□□□□ -2.65
ERCC4Q92889 HLA-S-202ENST00000425174 53 ntBASIC-1.48□□□□□ -2.65
ERCC4Q92889 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.49□□□□□ -2.65
ERCC4Q92889 AC138207.3-201ENST00000585289 166 ntBASIC-1.51□□□□□ -2.65
ERCC4Q92889 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.51□□□□□ -2.65
ERCC4Q92889 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.52□□□□□ -2.65
ERCC4Q92889 MIR4317-201ENST00000637586 65 ntBASIC-1.52□□□□□ -2.65
ERCC4Q92889 MIR379-201ENST00000362218 67 ntBASIC-1.53□□□□□ -2.65
ERCC4Q92889 MIR5591-201ENST00000578248 65 ntBASIC-1.53□□□□□ -2.65
ERCC4Q92889 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.54□□□□□ -2.66
ERCC4Q92889 RNU6-226P-201ENST00000363778 107 ntBASIC-1.55□□□□□ -2.66
ERCC4Q92889 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.55□□□□□ -2.66
ERCC4Q92889 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.57□□□□□ -2.66
ERCC4Q92889 MIR3123-201ENST00000583417 75 ntBASIC-1.58□□□□□ -2.66
ERCC4Q92889 RNU6-986P-201ENST00000363133 102 ntBASIC-1.59□□□□□ -2.66
ERCC4Q92889 RNY4P27-201ENST00000363341 96 ntBASIC-1.59□□□□□ -2.66
ERCC4Q92889 MIR4520-1-201ENST00000582609 70 ntBASIC-1.61□□□□□ -2.67
ERCC4Q92889 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.62□□□□□ -2.67
ERCC4Q92889 MIR4770-201ENST00000579149 58 ntBASIC-1.62□□□□□ -2.67
ERCC4Q92889 MIR545-201ENST00000385085 106 ntBASIC-1.63□□□□□ -2.67
ERCC4Q92889 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.63□□□□□ -2.67
ERCC4Q92889 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.63□□□□□ -2.67
ERCC4Q92889 MIR1246-201ENST00000636535 73 ntBASIC-1.63□□□□□ -2.67
ERCC4Q92889 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.64□□□□□ -2.67
ERCC4Q92889 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.64□□□□□ -2.67
ERCC4Q92889 RNU6-841P-201ENST00000383872 107 ntBASIC-1.66□□□□□ -2.68
ERCC4Q92889 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.68□□□□□ -2.68
ERCC4Q92889 RNU6-59P-201ENST00000384787 107 ntBASIC-1.68□□□□□ -2.68
ERCC4Q92889 RNU6-822P-201ENST00000362707 106 ntBASIC-1.69□□□□□ -2.68
ERCC4Q92889 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.69□□□□□ -2.68
ERCC4Q92889 MIR548H1-201ENST00000408610 102 ntBASIC-1.71□□□□□ -2.68
ERCC4Q92889 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.72□□□□□ -2.68
ERCC4Q92889 RNU6-912P-201ENST00000363800 104 ntBASIC-1.72□□□□□ -2.68
ERCC4Q92889 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.72□□□□□ -2.68
ERCC4Q92889 RNA5SP86-201ENST00000390869 98 ntBASIC-1.73□□□□□ -2.69
ERCC4Q92889 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.74□□□□□ -2.69
ERCC4Q92889 MIR548W-201ENST00000581970 74 ntBASIC-1.74□□□□□ -2.69
ERCC4Q92889 MIR548AM-201ENST00000584298 74 ntBASIC-1.75□□□□□ -2.69
ERCC4Q92889 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.76□□□□□ -2.69
ERCC4Q92889 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.76□□□□□ -2.69
ERCC4Q92889 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.76□□□□□ -2.69
ERCC4Q92889 snoU13.10-201ENST00000459301 103 ntBASIC-1.77□□□□□ -2.69
ERCC4Q92889 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.79□□□□□ -2.7
ERCC4Q92889 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.79□□□□□ -2.7
ERCC4Q92889 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.8□□□□□ -2.7
ERCC4Q92889 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.82□□□□□ -2.7
ERCC4Q92889 SNORD18.1-201ENST00000363807 70 ntBASIC-1.84□□□□□ -2.7
ERCC4Q92889 RNU6-983P-201ENST00000516004 103 ntBASIC-1.84□□□□□ -2.7
ERCC4Q92889 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.85□□□□□ -2.71
ERCC4Q92889 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.85□□□□□ -2.71
ERCC4Q92889 MIR487B-201ENST00000385021 84 ntBASIC-1.85□□□□□ -2.71
ERCC4Q92889 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.88□□□□□ -2.71
ERCC4Q92889 Y_RNA.206-201ENST00000364136 102 ntBASIC-1.91□□□□□ -2.72
ERCC4Q92889 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.93□□□□□ -2.72
ERCC4Q92889 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms