Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.48□□□□□ -2.65
SHFQ7M4L6 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.48□□□□□ -2.65
SHFQ7M4L6 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.48□□□□□ -2.65
SHFQ7M4L6 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.48□□□□□ -2.65
SHFQ7M4L6 RNU6-829P-201ENST00000363700 112 ntBASIC-1.49□□□□□ -2.65
SHFQ7M4L6 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.49□□□□□ -2.65
SHFQ7M4L6 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
SHFQ7M4L6 U4.2-201ENST00000618561 85 ntBASIC-1.49□□□□□ -2.65
SHFQ7M4L6 AL627230.5-201ENST00000619807 58 ntBASIC-1.49□□□□□ -2.65
SHFQ7M4L6 RNU6-530P-201ENST00000391180 107 ntBASIC-1.5□□□□□ -2.65
SHFQ7M4L6 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.51□□□□□ -2.65
SHFQ7M4L6 MIR202-201ENST00000362219 110 ntBASIC-1.52□□□□□ -2.65
SHFQ7M4L6 SNORD113-4-201ENST00000364802 75 ntBASIC-1.52□□□□□ -2.65
SHFQ7M4L6 RNU6-983P-201ENST00000516004 103 ntBASIC-1.52□□□□□ -2.65
SHFQ7M4L6 MIR548X-201ENST00000580069 75 ntBASIC-1.52□□□□□ -2.65
SHFQ7M4L6 SNORD114-3-201ENST00000364969 75 ntBASIC-1.53□□□□□ -2.65
SHFQ7M4L6 U6.97-201ENST00000636904 101 ntBASIC-1.54□□□□□ -2.66
SHFQ7M4L6 RNU6-361P-201ENST00000364454 107 ntBASIC-1.55□□□□□ -2.66
SHFQ7M4L6 AC079150.2-201ENST00000443733 78 ntBASIC-1.56□□□□□ -2.66
SHFQ7M4L6 SNORD60-201ENST00000383903 83 ntBASIC-1.57□□□□□ -2.66
SHFQ7M4L6 SNORD18.1-201ENST00000363807 70 ntBASIC-1.58□□□□□ -2.66
SHFQ7M4L6 SNORA17.4-201ENST00000391287 132 ntBASIC-1.58□□□□□ -2.66
SHFQ7M4L6 RNY4P27-201ENST00000363341 96 ntBASIC-1.59□□□□□ -2.66
SHFQ7M4L6 RNU6-695P-201ENST00000391157 104 ntBASIC-1.59□□□□□ -2.66
SHFQ7M4L6 RNA5SP86-201ENST00000390869 98 ntBASIC-1.6□□□□□ -2.67
SHFQ7M4L6 MIR548N-201ENST00000408742 75 ntBASIC-1.6□□□□□ -2.67
SHFQ7M4L6 RNU6-499P-201ENST00000365615 107 ntBASIC-1.61□□□□□ -2.67
SHFQ7M4L6 MIR4426-201ENST00000640330 63 ntBASIC-1.61□□□□□ -2.67
SHFQ7M4L6 RNU6-788P-201ENST00000390967 104 ntBASIC-1.62□□□□□ -2.67
SHFQ7M4L6 MIR548H1-201ENST00000408610 102 ntBASIC-1.62□□□□□ -2.67
SHFQ7M4L6 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.64□□□□□ -2.67
SHFQ7M4L6 MIR581-201ENST00000384895 96 ntBASIC-1.64□□□□□ -2.67
SHFQ7M4L6 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.64□□□□□ -2.67
SHFQ7M4L6 SNORD18C-201ENST00000362704 69 ntBASIC-1.65□□□□□ -2.67
SHFQ7M4L6 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.65□□□□□ -2.67
SHFQ7M4L6 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.65□□□□□ -2.67
SHFQ7M4L6 MIR1207-201ENST00000408249 87 ntBASIC-1.66□□□□□ -2.68
SHFQ7M4L6 RNU6-742P-201ENST00000365289 107 ntBASIC-1.67□□□□□ -2.68
SHFQ7M4L6 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.68□□□□□ -2.68
SHFQ7M4L6 RNU6-980P-201ENST00000516925 103 ntBASIC-1.68□□□□□ -2.68
SHFQ7M4L6 MIR3123-201ENST00000583417 75 ntBASIC-1.68□□□□□ -2.68
SHFQ7M4L6 MIR4723-201ENST00000585070 81 ntBASIC-1.68□□□□□ -2.68
SHFQ7M4L6 RNU4-33P-201ENST00000364316 85 ntBASIC-1.69□□□□□ -2.68
SHFQ7M4L6 RNU6-300P-201ENST00000459080 104 ntBASIC-1.7□□□□□ -2.68
SHFQ7M4L6 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.71□□□□□ -2.68
SHFQ7M4L6 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.71□□□□□ -2.68
SHFQ7M4L6 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.71□□□□□ -2.68
SHFQ7M4L6 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.71□□□□□ -2.68
SHFQ7M4L6 RNU6-119P-201ENST00000364882 107 ntBASIC-1.73□□□□□ -2.69
SHFQ7M4L6 MIR487B-201ENST00000385021 84 ntBASIC-1.73□□□□□ -2.69
SHFQ7M4L6 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.73□□□□□ -2.69
SHFQ7M4L6 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.74□□□□□ -2.69
SHFQ7M4L6 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.74□□□□□ -2.69
SHFQ7M4L6 RNU6-176P-201ENST00000517196 105 ntBASIC-1.74□□□□□ -2.69
SHFQ7M4L6 RNU6-118P-201ENST00000516552 102 ntBASIC-1.75□□□□□ -2.69
SHFQ7M4L6 RNU6-841P-201ENST00000383872 107 ntBASIC-1.76□□□□□ -2.69
SHFQ7M4L6 AC108019.1-201ENST00000512540 175 ntBASIC-1.76□□□□□ -2.69
SHFQ7M4L6 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.76□□□□□ -2.69
SHFQ7M4L6 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.78□□□□□ -2.69
SHFQ7M4L6 MIR496-201ENST00000385226 102 ntBASIC-1.78□□□□□ -2.69
SHFQ7M4L6 MIR4756-201ENST00000577874 78 ntBASIC-1.79□□□□□ -2.7
SHFQ7M4L6 MIR664B-201ENST00000626756 61 ntBASIC-1.8□□□□□ -2.7
SHFQ7M4L6 RNU6-68P-201ENST00000516576 104 ntBASIC-1.81□□□□□ -2.7
SHFQ7M4L6 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.81□□□□□ -2.7
SHFQ7M4L6 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.82□□□□□ -2.7
SHFQ7M4L6 MIR379-201ENST00000362218 67 ntBASIC-1.83□□□□□ -2.7
SHFQ7M4L6 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.83□□□□□ -2.7
SHFQ7M4L6 MIR548AM-201ENST00000584298 74 ntBASIC-1.83□□□□□ -2.7
SHFQ7M4L6 MIR548AL-201ENST00000578416 97 ntBASIC-1.85□□□□□ -2.71
SHFQ7M4L6 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.87□□□□□ -2.71
SHFQ7M4L6 snoU13.10-201ENST00000459301 103 ntBASIC-1.87□□□□□ -2.71
SHFQ7M4L6 MIR3139-201ENST00000579145 76 ntBASIC-1.87□□□□□ -2.71
SHFQ7M4L6 MIR548W-201ENST00000581970 74 ntBASIC-1.87□□□□□ -2.71
SHFQ7M4L6 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.87□□□□□ -2.71
SHFQ7M4L6 RNU6-936P-201ENST00000384005 107 ntBASIC-1.88□□□□□ -2.71
SHFQ7M4L6 RNU6-614P-201ENST00000384369 107 ntBASIC-1.88□□□□□ -2.71
SHFQ7M4L6 U6.59-201ENST00000615686 107 ntBASIC-1.88□□□□□ -2.71
SHFQ7M4L6 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.89□□□□□ -2.71
SHFQ7M4L6 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.9□□□□□ -2.71
SHFQ7M4L6 SNORD54-201ENST00000459159 67 ntBASIC-1.91□□□□□ -2.72
SHFQ7M4L6 RNA5SP405-201ENST00000363059 114 ntBASIC-1.92□□□□□ -2.72
SHFQ7M4L6 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.92□□□□□ -2.72
SHFQ7M4L6 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.92□□□□□ -2.72
SHFQ7M4L6 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.92□□□□□ -2.72
SHFQ7M4L6 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.92□□□□□ -2.72
SHFQ7M4L6 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.93□□□□□ -2.72
SHFQ7M4L6 MT-TM-201ENST00000387377 68 ntBASIC-1.93□□□□□ -2.72
SHFQ7M4L6 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.93□□□□□ -2.72
SHFQ7M4L6 MIR4317-201ENST00000637586 65 ntBASIC-1.93□□□□□ -2.72
SHFQ7M4L6 RNU6-838P-201ENST00000363399 108 ntBASIC-1.94□□□□□ -2.72
SHFQ7M4L6 RNU6-912P-201ENST00000363800 104 ntBASIC-1.94□□□□□ -2.72
SHFQ7M4L6 RNU6-753P-201ENST00000363926 107 ntBASIC-1.94□□□□□ -2.72
SHFQ7M4L6 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.95□□□□□ -2.72
SHFQ7M4L6 MIR548H4-201ENST00000408689 111 ntBASIC-1.95□□□□□ -2.72
SHFQ7M4L6 RNU6-194P-201ENST00000363862 105 ntBASIC-1.96□□□□□ -2.72
SHFQ7M4L6 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.97□□□□□ -2.72
SHFQ7M4L6 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.99□□□□□ -2.73
SHFQ7M4L6 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.99□□□□□ -2.73
SHFQ7M4L6 RNU6-808P-201ENST00000391233 108 ntBASIC-1.99□□□□□ -2.73
SHFQ7M4L6 RNA5SP93-201ENST00000362525 114 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms