Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 HLA-S-202ENST00000425174 53 ntBASIC-0.96□□□□□ -2.56
SF3B3Q15393 MIR5591-201ENST00000578248 65 ntBASIC-0.96□□□□□ -2.56
SF3B3Q15393 AC013734.1-201ENST00000619329 111 ntBASIC-0.96□□□□□ -2.56
SF3B3Q15393 MIR4426-201ENST00000640330 63 ntBASIC-0.96□□□□□ -2.56
SF3B3Q15393 SNORA17.4-201ENST00000391287 132 ntBASIC-0.97□□□□□ -2.56
SF3B3Q15393 MIR6502-201ENST00000617296 76 ntBASIC-0.97□□□□□ -2.56
SF3B3Q15393 RNU6-79P-201ENST00000362511 107 ntBASIC-0.98□□□□□ -2.57
SF3B3Q15393 RNU6-838P-201ENST00000363399 108 ntBASIC-0.98□□□□□ -2.57
SF3B3Q15393 MIR548AL-201ENST00000578416 97 ntBASIC-0.98□□□□□ -2.57
SF3B3Q15393 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.98□□□□□ -2.57
SF3B3Q15393 SNORD60-201ENST00000383903 83 ntBASIC-0.99□□□□□ -2.57
SF3B3Q15393 MIR1246-201ENST00000636535 73 ntBASIC-1□□□□□ -2.57
SF3B3Q15393 MIR548N-201ENST00000408742 75 ntBASIC-1.01□□□□□ -2.57
SF3B3Q15393 MIR4770-201ENST00000579149 58 ntBASIC-1.01□□□□□ -2.57
SF3B3Q15393 AC091912.2-201ENST00000624798 167 ntBASIC-1.01□□□□□ -2.57
SF3B3Q15393 RNA5SP266-201ENST00000410273 108 ntBASIC-1.02□□□□□ -2.57
SF3B3Q15393 RNU4-88P-201ENST00000411220 86 ntBASIC-1.02□□□□□ -2.57
SF3B3Q15393 AL627230.5-201ENST00000619807 58 ntBASIC-1.02□□□□□ -2.57
SF3B3Q15393 RNA5SP86-201ENST00000390869 98 ntBASIC-1.04□□□□□ -2.58
SF3B3Q15393 RNU6-930P-201ENST00000390938 100 ntBASIC-1.04□□□□□ -2.58
SF3B3Q15393 MIR4520-1-201ENST00000582609 70 ntBASIC-1.04□□□□□ -2.58
SF3B3Q15393 MIR6874-201ENST00000635894 71 ntBASIC-1.04□□□□□ -2.58
SF3B3Q15393 MIR409-201ENST00000362237 79 ntBASIC-1.05□□□□□ -2.58
SF3B3Q15393 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.05□□□□□ -2.58
SF3B3Q15393 RNU6-300P-201ENST00000459080 104 ntBASIC-1.05□□□□□ -2.58
SF3B3Q15393 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.06□□□□□ -2.58
SF3B3Q15393 MIR548F3-201ENST00000408509 87 ntBASIC-1.07□□□□□ -2.58
SF3B3Q15393 RNU6-176P-201ENST00000517196 105 ntBASIC-1.07□□□□□ -2.58
SF3B3Q15393 U6.97-201ENST00000636904 101 ntBASIC-1.07□□□□□ -2.58
SF3B3Q15393 MIR581-201ENST00000384895 96 ntBASIC-1.08□□□□□ -2.58
SF3B3Q15393 MIR1285-2-201ENST00000408311 88 ntBASIC-1.08□□□□□ -2.58
SF3B3Q15393 RNU6-983P-201ENST00000516004 103 ntBASIC-1.09□□□□□ -2.58
SF3B3Q15393 RNU6-400P-201ENST00000391173 106 ntBASIC-1.1□□□□□ -2.59
SF3B3Q15393 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.11□□□□□ -2.59
SF3B3Q15393 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.11□□□□□ -2.59
SF3B3Q15393 DLEU2_4.2-201ENST00000616613 58 ntBASIC-1.11□□□□□ -2.59
SF3B3Q15393 SNORD18C-201ENST00000362704 69 ntBASIC-1.12□□□□□ -2.59
SF3B3Q15393 RNU6-1204P-201ENST00000363948 107 ntBASIC-1.12□□□□□ -2.59
SF3B3Q15393 SNORD18.1-201ENST00000363807 70 ntBASIC-1.13□□□□□ -2.59
SF3B3Q15393 MIR487B-201ENST00000385021 84 ntBASIC-1.13□□□□□ -2.59
SF3B3Q15393 MIR601-201ENST00000385256 79 ntBASIC-1.13□□□□□ -2.59
SF3B3Q15393 MIR548H4-201ENST00000408689 111 ntBASIC-1.13□□□□□ -2.59
SF3B3Q15393 MIR4441-201ENST00000582623 100 ntBASIC-1.13□□□□□ -2.59
SF3B3Q15393 MIR365A-201ENST00000362260 87 ntBASIC-1.15□□□□□ -2.59
SF3B3Q15393 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.16□□□□□ -2.6
SF3B3Q15393 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.16□□□□□ -2.6
SF3B3Q15393 U4.2-201ENST00000618561 85 ntBASIC-1.16□□□□□ -2.6
SF3B3Q15393 MIR548H1-201ENST00000408610 102 ntBASIC-1.17□□□□□ -2.6
SF3B3Q15393 SNX3P1X-201ENST00000414887 175 ntBASIC-1.17□□□□□ -2.6
SF3B3Q15393 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.18□□□□□ -2.6
SF3B3Q15393 AC108019.1-201ENST00000512540 175 ntBASIC-1.18□□□□□ -2.6
SF3B3Q15393 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.18□□□□□ -2.6
SF3B3Q15393 MIR4756-201ENST00000577874 78 ntBASIC-1.18□□□□□ -2.6
SF3B3Q15393 MIR4317-201ENST00000637586 65 ntBASIC-1.18□□□□□ -2.6
SF3B3Q15393 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.19□□□□□ -2.6
SF3B3Q15393 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.2□□□□□ -2.6
SF3B3Q15393 RNU6-68P-201ENST00000516576 104 ntBASIC-1.2□□□□□ -2.6
SF3B3Q15393 MIR198-201ENST00000637333 62 ntBASIC-1.2□□□□□ -2.6
SF3B3Q15393 RNA5SP331-201ENST00000364986 107 ntBASIC-1.21□□□□□ -2.6
SF3B3Q15393 RNU6-695P-201ENST00000391157 104 ntBASIC-1.21□□□□□ -2.6
SF3B3Q15393 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.21□□□□□ -2.6
SF3B3Q15393 RNU6-986P-201ENST00000363133 102 ntBASIC-1.22□□□□□ -2.6
SF3B3Q15393 RNY4P27-201ENST00000363341 96 ntBASIC-1.22□□□□□ -2.6
SF3B3Q15393 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 MIR545-201ENST00000385085 106 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 MIR664B-201ENST00000626756 61 ntBASIC-1.23□□□□□ -2.61
SF3B3Q15393 MIR379-201ENST00000362218 67 ntBASIC-1.24□□□□□ -2.61
SF3B3Q15393 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.25□□□□□ -2.61
SF3B3Q15393 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.25□□□□□ -2.61
SF3B3Q15393 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.26□□□□□ -2.61
SF3B3Q15393 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.27□□□□□ -2.61
SF3B3Q15393 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.28□□□□□ -2.61
SF3B3Q15393 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.28□□□□□ -2.61
SF3B3Q15393 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.28□□□□□ -2.61
SF3B3Q15393 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.29□□□□□ -2.62
SF3B3Q15393 MIR496-201ENST00000385226 102 ntBASIC-1.29□□□□□ -2.62
SF3B3Q15393 RNU6-118P-201ENST00000516552 102 ntBASIC-1.29□□□□□ -2.62
SF3B3Q15393 RNU6-822P-201ENST00000362707 106 ntBASIC-1.3□□□□□ -2.62
SF3B3Q15393 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.3□□□□□ -2.62
SF3B3Q15393 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.3□□□□□ -2.62
SF3B3Q15393 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.3□□□□□ -2.62
SF3B3Q15393 MIR3123-201ENST00000583417 75 ntBASIC-1.3□□□□□ -2.62
SF3B3Q15393 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.31□□□□□ -2.62
SF3B3Q15393 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.32□□□□□ -2.62
SF3B3Q15393 SNORD114-3-201ENST00000364969 75 ntBASIC-1.32□□□□□ -2.62
SF3B3Q15393 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.32□□□□□ -2.62
SF3B3Q15393 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.32□□□□□ -2.62
SF3B3Q15393 MIR3139-201ENST00000579145 76 ntBASIC-1.32□□□□□ -2.62
SF3B3Q15393 RNA5SP405-201ENST00000363059 114 ntBASIC-1.33□□□□□ -2.62
SF3B3Q15393 Y_RNA.345-201ENST00000365384 92 ntBASIC-1.34□□□□□ -2.62
SF3B3Q15393 RNU6-59P-201ENST00000384787 107 ntBASIC-1.34□□□□□ -2.62
SF3B3Q15393 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.36□□□□□ -2.63
SF3B3Q15393 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.37□□□□□ -2.63
SF3B3Q15393 RNU6-912P-201ENST00000363800 104 ntBASIC-1.38□□□□□ -2.63
SF3B3Q15393 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
SF3B3Q15393 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.39□□□□□ -2.63
SF3B3Q15393 RNU6-841P-201ENST00000383872 107 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 367.8 ms