Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 RNU6-35P-201ENST00000384530 107 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 MIR633-201ENST00000384821 98 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 MIR587-201ENST00000384845 96 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
CKAP4Q07065 RNA5SP25-201ENST00000410815 110 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 MIR664B-201ENST00000626756 61 ntBASIC-0.63□□□□□ -2.51
CKAP4Q07065 SNORD113-3-201ENST00000364830 72 ntBASIC-0.64□□□□□ -2.51
CKAP4Q07065 AC079150.2-201ENST00000443733 78 ntBASIC-0.64□□□□□ -2.51
CKAP4Q07065 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.64□□□□□ -2.51
CKAP4Q07065 MIR4426-201ENST00000640330 63 ntBASIC-0.64□□□□□ -2.51
CKAP4Q07065 SNORD95.1-201ENST00000364099 68 ntBASIC-0.65□□□□□ -2.51
CKAP4Q07065 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.65□□□□□ -2.51
CKAP4Q07065 RNU6-590P-201ENST00000365039 107 ntBASIC-0.65□□□□□ -2.51
CKAP4Q07065 RNU6-912P-201ENST00000363800 104 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 SNORD60-201ENST00000383903 83 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 RNU6-983P-201ENST00000516004 103 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 RNA5SP180-201ENST00000516181 101 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 SNORA72.7-201ENST00000516349 94 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 MIR3165-201ENST00000579874 75 ntBASIC-0.66□□□□□ -2.52
CKAP4Q07065 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.67□□□□□ -2.52
CKAP4Q07065 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.67□□□□□ -2.52
CKAP4Q07065 MIR4320-201ENST00000636981 65 ntBASIC-0.67□□□□□ -2.52
CKAP4Q07065 RNU4-33P-201ENST00000364316 85 ntBASIC-0.68□□□□□ -2.52
CKAP4Q07065 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.68□□□□□ -2.52
CKAP4Q07065 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.68□□□□□ -2.52
CKAP4Q07065 MIR4748-201ENST00000578076 82 ntBASIC-0.68□□□□□ -2.52
CKAP4Q07065 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-0.68□□□□□ -2.52
CKAP4Q07065 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 RNU6-300P-201ENST00000459080 104 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 AC097484.2-201ENST00000509147 251 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 MIR548AX-201ENST00000580117 73 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 MIR1246-201ENST00000636535 73 ntBASIC-0.69□□□□□ -2.52
CKAP4Q07065 MIR379-201ENST00000362218 67 ntBASIC-0.7□□□□□ -2.52
CKAP4Q07065 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.7□□□□□ -2.52
CKAP4Q07065 RNA5SP405-201ENST00000363059 114 ntBASIC-0.7□□□□□ -2.52
CKAP4Q07065 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.7□□□□□ -2.52
CKAP4Q07065 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
CKAP4Q07065 MIR548AL-201ENST00000578416 97 ntBASIC-0.7□□□□□ -2.52
CKAP4Q07065 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.71□□□□□ -2.52
CKAP4Q07065 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.71□□□□□ -2.52
CKAP4Q07065 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.71□□□□□ -2.52
CKAP4Q07065 MIR548F3-201ENST00000408509 87 ntBASIC-0.71□□□□□ -2.52
CKAP4Q07065 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
CKAP4Q07065 SNORD45.2-201ENST00000363552 72 ntBASIC-0.72□□□□□ -2.52
CKAP4Q07065 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.72□□□□□ -2.52
CKAP4Q07065 RNU6-499P-201ENST00000365615 107 ntBASIC-0.72□□□□□ -2.52
CKAP4Q07065 RNU6-141P-201ENST00000410499 105 ntBASIC-0.72□□□□□ -2.52
CKAP4Q07065 MIR6086-201ENST00000638065 55 ntBASIC-0.72□□□□□ -2.52
CKAP4Q07065 RNU6-986P-201ENST00000363133 102 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 RNA5SP224-201ENST00000365069 126 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 RNU6-176P-201ENST00000517196 105 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 FTX_4.1-201ENST00000616291 147 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.73□□□□□ -2.53
CKAP4Q07065 RNU6-838P-201ENST00000363399 108 ntBASIC-0.74□□□□□ -2.53
CKAP4Q07065 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.74□□□□□ -2.53
CKAP4Q07065 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.74□□□□□ -2.53
CKAP4Q07065 RNU6-59P-201ENST00000384787 107 ntBASIC-0.74□□□□□ -2.53
CKAP4Q07065 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-0.74□□□□□ -2.53
CKAP4Q07065 MIR7111-201ENST00000619751 72 ntBASIC-0.74□□□□□ -2.53
CKAP4Q07065 RNU6-854P-201ENST00000364036 107 ntBASIC-0.75□□□□□ -2.53
CKAP4Q07065 MIR1254-1-201ENST00000408257 97 ntBASIC-0.75□□□□□ -2.53
CKAP4Q07065 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.76□□□□□ -2.53
CKAP4Q07065 RNU6-808P-201ENST00000391233 108 ntBASIC-0.76□□□□□ -2.53
CKAP4Q07065 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.77□□□□□ -2.53
CKAP4Q07065 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.77□□□□□ -2.53
CKAP4Q07065 AC125388.1-201ENST00000459631 156 ntBASIC-0.77□□□□□ -2.53
CKAP4Q07065 RNU6-118P-201ENST00000516552 102 ntBASIC-0.77□□□□□ -2.53
CKAP4Q07065 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.78□□□□□ -2.53
CKAP4Q07065 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.78□□□□□ -2.53
CKAP4Q07065 RNU6-345P-201ENST00000517001 107 ntBASIC-0.78□□□□□ -2.53
CKAP4Q07065 MIR3139-201ENST00000579145 76 ntBASIC-0.78□□□□□ -2.53
CKAP4Q07065 RNU6-753P-201ENST00000363926 107 ntBASIC-0.79□□□□□ -2.54
CKAP4Q07065 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.8□□□□□ -2.54
CKAP4Q07065 RNU6-194P-201ENST00000363862 105 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 RNU6-936P-201ENST00000384005 107 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 RNU6-788P-201ENST00000390967 104 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 AL731768.1-201ENST00000603124 139 ntBASIC-0.81□□□□□ -2.54
CKAP4Q07065 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.82□□□□□ -2.54
CKAP4Q07065 MIR545-201ENST00000385085 106 ntBASIC-0.82□□□□□ -2.54
CKAP4Q07065 MIR656-201ENST00000385224 78 ntBASIC-0.82□□□□□ -2.54
CKAP4Q07065 MIR1285-2-201ENST00000408311 88 ntBASIC-0.82□□□□□ -2.54
CKAP4Q07065 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms