Protein–RNA interactions for Protein: Q00056

HOXA4, Homeobox protein Hox-A4, humanhuman

Predicted RBP Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4Q00056 MIR496-201ENST00000385226 102 ntBASIC-0.39□□□□□ -2.47
HOXA4Q00056 RNU6-930P-201ENST00000390938 100 ntBASIC-0.39□□□□□ -2.47
HOXA4Q00056 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.39□□□□□ -2.47
HOXA4Q00056 AC013734.1-201ENST00000619329 111 ntBASIC-0.39□□□□□ -2.47
HOXA4Q00056 MIR202-201ENST00000362219 110 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 SNORD83B-201ENST00000386745 93 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 MIR1207-201ENST00000408249 87 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 MIR4441-201ENST00000582623 100 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 DLEU2_4.2-201ENST00000616613 58 ntBASIC-0.4□□□□□ -2.47
HOXA4Q00056 RNU6-838P-201ENST00000363399 108 ntBASIC-0.41□□□□□ -2.48
HOXA4Q00056 SNORD114-3-201ENST00000364969 75 ntBASIC-0.41□□□□□ -2.48
HOXA4Q00056 MIR382-201ENST00000637119 76 ntBASIC-0.41□□□□□ -2.48
HOXA4Q00056 RNA5SP93-201ENST00000362525 114 ntBASIC-0.42□□□□□ -2.48
HOXA4Q00056 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.42□□□□□ -2.48
HOXA4Q00056 uc_338.19-201ENST00000616808 99 ntBASIC-0.42□□□□□ -2.48
HOXA4Q00056 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.43□□□□□ -2.48
HOXA4Q00056 MIR548H4-201ENST00000408689 111 ntBASIC-0.43□□□□□ -2.48
HOXA4Q00056 MIR548AL-201ENST00000578416 97 ntBASIC-0.43□□□□□ -2.48
HOXA4Q00056 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.44□□□□□ -2.48
HOXA4Q00056 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.44□□□□□ -2.48
HOXA4Q00056 MIR545-201ENST00000385085 106 ntBASIC-0.44□□□□□ -2.48
HOXA4Q00056 MIR581-201ENST00000384895 96 ntBASIC-0.45□□□□□ -2.48
HOXA4Q00056 MIR6818-201ENST00000621576 65 ntBASIC-0.45□□□□□ -2.48
HOXA4Q00056 MIR4426-201ENST00000640330 63 ntBASIC-0.45□□□□□ -2.48
HOXA4Q00056 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.46□□□□□ -2.48
HOXA4Q00056 MIR4306-201ENST00000583390 91 ntBASIC-0.46□□□□□ -2.48
HOXA4Q00056 SNORD45.2-201ENST00000363552 72 ntBASIC-0.47□□□□□ -2.48
HOXA4Q00056 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.47□□□□□ -2.48
HOXA4Q00056 AC120024.2-201ENST00000576526 175 ntBASIC-0.47□□□□□ -2.48
HOXA4Q00056 MIR3165-201ENST00000579874 75 ntBASIC-0.47□□□□□ -2.48
HOXA4Q00056 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.47□□□□□ -2.48
HOXA4Q00056 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.48□□□□□ -2.49
HOXA4Q00056 RNU6-118P-201ENST00000516552 102 ntBASIC-0.48□□□□□ -2.49
HOXA4Q00056 MIR198-201ENST00000637333 62 ntBASIC-0.48□□□□□ -2.49
HOXA4Q00056 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.49□□□□□ -2.49
HOXA4Q00056 snoU83B.1-201ENST00000517136 88 ntBASIC-0.49□□□□□ -2.49
HOXA4Q00056 U6.97-201ENST00000636904 101 ntBASIC-0.49□□□□□ -2.49
HOXA4Q00056 RNU6-361P-201ENST00000364454 107 ntBASIC-0.5□□□□□ -2.49
HOXA4Q00056 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.5□□□□□ -2.49
HOXA4Q00056 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.51□□□□□ -2.49
HOXA4Q00056 HLA-S-202ENST00000425174 53 ntBASIC-0.51□□□□□ -2.49
HOXA4Q00056 SNORA17.4-201ENST00000391287 132 ntBASIC-0.52□□□□□ -2.49
HOXA4Q00056 RNU6-983P-201ENST00000516004 103 ntBASIC-0.52□□□□□ -2.49
HOXA4Q00056 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.52□□□□□ -2.49
HOXA4Q00056 MIR5591-201ENST00000578248 65 ntBASIC-0.52□□□□□ -2.49
HOXA4Q00056 MIR487B-201ENST00000385021 84 ntBASIC-0.53□□□□□ -2.49
HOXA4Q00056 MIR6874-201ENST00000635894 71 ntBASIC-0.53□□□□□ -2.49
HOXA4Q00056 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.54□□□□□ -2.5
HOXA4Q00056 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.54□□□□□ -2.5
HOXA4Q00056 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.54□□□□□ -2.5
HOXA4Q00056 RNU6-706P-201ENST00000517229 104 ntBASIC-0.54□□□□□ -2.5
HOXA4Q00056 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.55□□□□□ -2.5
HOXA4Q00056 RNU6-68P-201ENST00000516576 104 ntBASIC-0.55□□□□□ -2.5
HOXA4Q00056 MIR23C-201ENST00000579846 100 ntBASIC-0.55□□□□□ -2.5
HOXA4Q00056 AC091912.2-201ENST00000624798 167 ntBASIC-0.55□□□□□ -2.5
HOXA4Q00056 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.56□□□□□ -2.5
HOXA4Q00056 Y_RNA.564-201ENST00000384708 106 ntBASIC-0.56□□□□□ -2.5
HOXA4Q00056 MIR548N-201ENST00000408742 75 ntBASIC-0.56□□□□□ -2.5
HOXA4Q00056 RNU6-300P-201ENST00000459080 104 ntBASIC-0.56□□□□□ -2.5
HOXA4Q00056 MIR4520-1-201ENST00000582609 70 ntBASIC-0.56□□□□□ -2.5
HOXA4Q00056 MIR4756-201ENST00000577874 78 ntBASIC-0.57□□□□□ -2.5
HOXA4Q00056 RNU6-164P-201ENST00000364604 103 ntBASIC-0.58□□□□□ -2.5
HOXA4Q00056 RNA5SP86-201ENST00000390869 98 ntBASIC-0.58□□□□□ -2.5
HOXA4Q00056 AC018880.2-201ENST00000414265 201 ntBASIC-0.58□□□□□ -2.5
HOXA4Q00056 MIR3139-201ENST00000579145 76 ntBASIC-0.58□□□□□ -2.5
HOXA4Q00056 MIR6502-201ENST00000617296 76 ntBASIC-0.58□□□□□ -2.5
HOXA4Q00056 RNU6-79P-201ENST00000362511 107 ntBASIC-0.59□□□□□ -2.5
HOXA4Q00056 SNORD18.1-201ENST00000363807 70 ntBASIC-0.59□□□□□ -2.5
HOXA4Q00056 RNU6-1204P-201ENST00000363948 107 ntBASIC-0.6□□□□□ -2.51
HOXA4Q00056 RNY4-201ENST00000516507 96 ntBASIC-0.6□□□□□ -2.51
HOXA4Q00056 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.6□□□□□ -2.51
HOXA4Q00056 RNY4P7-201ENST00000364600 96 ntBASIC-0.61□□□□□ -2.51
HOXA4Q00056 RNU6-576P-201ENST00000390854 102 ntBASIC-0.61□□□□□ -2.51
HOXA4Q00056 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.62□□□□□ -2.51
HOXA4Q00056 SNORD60-201ENST00000383903 83 ntBASIC-0.62□□□□□ -2.51
HOXA4Q00056 RNU6-59P-201ENST00000384787 107 ntBASIC-0.62□□□□□ -2.51
HOXA4Q00056 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.62□□□□□ -2.51
HOXA4Q00056 RNU6-119P-201ENST00000364882 107 ntBASIC-0.63□□□□□ -2.51
HOXA4Q00056 RNU6-695P-201ENST00000391157 104 ntBASIC-0.63□□□□□ -2.51
HOXA4Q00056 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.63□□□□□ -2.51
HOXA4Q00056 AC108019.1-201ENST00000512540 175 ntBASIC-0.63□□□□□ -2.51
HOXA4Q00056 RNU6-822P-201ENST00000362707 106 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 MT-TM-201ENST00000387377 68 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 MIR4770-201ENST00000579149 58 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.64□□□□□ -2.51
HOXA4Q00056 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.65□□□□□ -2.51
HOXA4Q00056 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.66□□□□□ -2.52
HOXA4Q00056 AC138207.3-201ENST00000585289 166 ntBASIC-0.66□□□□□ -2.52
HOXA4Q00056 Y_RNA.211-201ENST00000364164 101 ntBASIC-0.67□□□□□ -2.52
HOXA4Q00056 SNORD54-201ENST00000459159 67 ntBASIC-0.67□□□□□ -2.52
HOXA4Q00056 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.67□□□□□ -2.52
HOXA4Q00056 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.67□□□□□ -2.52
HOXA4Q00056 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.68□□□□□ -2.52
HOXA4Q00056 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.68□□□□□ -2.52
HOXA4Q00056 MIR4317-201ENST00000637586 65 ntBASIC-0.68□□□□□ -2.52
HOXA4Q00056 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.69□□□□□ -2.52
HOXA4Q00056 MIR548H1-201ENST00000408610 102 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms