Protein–RNA interactions for Protein: P61574

HERVK_113, Endogenous retrovirus group K member 113 Rec protein, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P61574 RNU6-590P-201ENST00000365039 107 ntBASIC-1.64□□□□□ -2.67
HERVK_113P61574 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.64□□□□□ -2.67
HERVK_113P61574 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
HERVK_113P61574 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-1.64□□□□□ -2.67
HERVK_113P61574 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.64□□□□□ -2.67
HERVK_113P61574 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.66□□□□□ -2.68
HERVK_113P61574 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.67□□□□□ -2.68
HERVK_113P61574 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.67□□□□□ -2.68
HERVK_113P61574 RNU6-980P-201ENST00000516925 103 ntBASIC-1.68□□□□□ -2.68
HERVK_113P61574 MIR548AX-201ENST00000580117 73 ntBASIC-1.69□□□□□ -2.68
HERVK_113P61574 RNA5SP25-201ENST00000410815 110 ntBASIC-1.7□□□□□ -2.68
HERVK_113P61574 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.71□□□□□ -2.68
HERVK_113P61574 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.72□□□□□ -2.68
HERVK_113P61574 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.72□□□□□ -2.68
HERVK_113P61574 MIR1246-201ENST00000636535 73 ntBASIC-1.72□□□□□ -2.68
HERVK_113P61574 SNORD113-3-201ENST00000364830 72 ntBASIC-1.73□□□□□ -2.69
HERVK_113P61574 AC125388.1-201ENST00000459631 156 ntBASIC-1.73□□□□□ -2.69
HERVK_113P61574 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
HERVK_113P61574 RNU6-983P-201ENST00000516004 103 ntBASIC-1.74□□□□□ -2.69
HERVK_113P61574 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.74□□□□□ -2.69
HERVK_113P61574 RNU4-33P-201ENST00000364316 85 ntBASIC-1.75□□□□□ -2.69
HERVK_113P61574 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.75□□□□□ -2.69
HERVK_113P61574 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.75□□□□□ -2.69
HERVK_113P61574 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.75□□□□□ -2.69
HERVK_113P61574 AC139453.2-201ENST00000487255 133 ntBASIC-1.76□□□□□ -2.69
HERVK_113P61574 Y_RNA.722-201ENST00000517279 114 ntBASIC-1.76□□□□□ -2.69
HERVK_113P61574 MIR664B-201ENST00000626756 61 ntBASIC-1.76□□□□□ -2.69
HERVK_113P61574 MIR379-201ENST00000362218 67 ntBASIC-1.77□□□□□ -2.69
HERVK_113P61574 MIR1254-1-201ENST00000408257 97 ntBASIC-1.77□□□□□ -2.69
HERVK_113P61574 AC079150.2-201ENST00000443733 78 ntBASIC-1.77□□□□□ -2.69
HERVK_113P61574 AC097484.2-201ENST00000509147 251 ntBASIC-1.77□□□□□ -2.69
HERVK_113P61574 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.77□□□□□ -2.69
HERVK_113P61574 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.78□□□□□ -2.69
HERVK_113P61574 RNU6-176P-201ENST00000517196 105 ntBASIC-1.78□□□□□ -2.69
HERVK_113P61574 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-1.78□□□□□ -2.69
HERVK_113P61574 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.79□□□□□ -2.7
HERVK_113P61574 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 SNORD114-15-201ENST00000364687 72 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.8□□□□□ -2.7
HERVK_113P61574 RNU6-1169P-201ENST00000363537 103 ntBASIC-1.81□□□□□ -2.7
HERVK_113P61574 RNU6-1008P-201ENST00000384160 104 ntBASIC-1.81□□□□□ -2.7
HERVK_113P61574 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.83□□□□□ -2.7
HERVK_113P61574 MIR548H4-201ENST00000408689 111 ntBASIC-1.83□□□□□ -2.7
HERVK_113P61574 RNU6-118P-201ENST00000516552 102 ntBASIC-1.83□□□□□ -2.7
HERVK_113P61574 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.84□□□□□ -2.7
HERVK_113P61574 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.84□□□□□ -2.7
HERVK_113P61574 Y_RNA.382-201ENST00000365672 114 ntBASIC-1.85□□□□□ -2.71
HERVK_113P61574 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.85□□□□□ -2.71
HERVK_113P61574 RNU6-499P-201ENST00000365615 107 ntBASIC-1.86□□□□□ -2.71
HERVK_113P61574 MIR548AL-201ENST00000578416 97 ntBASIC-1.86□□□□□ -2.71
HERVK_113P61574 MIR4320-201ENST00000636981 65 ntBASIC-1.86□□□□□ -2.71
HERVK_113P61574 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.87□□□□□ -2.71
HERVK_113P61574 FTX_4.1-201ENST00000616291 147 ntBASIC-1.87□□□□□ -2.71
HERVK_113P61574 RNA5SP180-201ENST00000516181 101 ntBASIC-1.88□□□□□ -2.71
HERVK_113P61574 RNA5SP405-201ENST00000363059 114 ntBASIC-1.89□□□□□ -2.71
HERVK_113P61574 RNU6-194P-201ENST00000363862 105 ntBASIC-1.89□□□□□ -2.71
HERVK_113P61574 MIR4317-201ENST00000637586 65 ntBASIC-1.89□□□□□ -2.71
HERVK_113P61574 Y_RNA.379-201ENST00000365653 102 ntBASIC-1.9□□□□□ -2.71
HERVK_113P61574 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
HERVK_113P61574 RNU6-35P-201ENST00000384530 107 ntBASIC-1.91□□□□□ -2.72
HERVK_113P61574 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.92□□□□□ -2.72
HERVK_113P61574 RNU6-141P-201ENST00000410499 105 ntBASIC-1.92□□□□□ -2.72
HERVK_113P61574 MIR4748-201ENST00000578076 82 ntBASIC-1.92□□□□□ -2.72
HERVK_113P61574 RNU6-936P-201ENST00000384005 107 ntBASIC-1.93□□□□□ -2.72
HERVK_113P61574 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.93□□□□□ -2.72
HERVK_113P61574 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.94□□□□□ -2.72
HERVK_113P61574 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.94□□□□□ -2.72
HERVK_113P61574 RNU6-753P-201ENST00000363926 107 ntBASIC-1.95□□□□□ -2.72
HERVK_113P61574 RNU6-986P-201ENST00000363133 102 ntBASIC-1.96□□□□□ -2.72
HERVK_113P61574 MIR1285-2-201ENST00000408311 88 ntBASIC-1.96□□□□□ -2.72
HERVK_113P61574 SNORD115.2-201ENST00000391126 59 ntBASIC-1.97□□□□□ -2.72
HERVK_113P61574 RNU6-838P-201ENST00000363399 108 ntBASIC-1.98□□□□□ -2.73
HERVK_113P61574 RNA5SP67-201ENST00000516422 131 ntBASIC-1.98□□□□□ -2.73
HERVK_113P61574 RNU6-345P-201ENST00000517001 107 ntBASIC-1.98□□□□□ -2.73
HERVK_113P61574 RNU6-822P-201ENST00000362707 106 ntBASIC-1.99□□□□□ -2.73
HERVK_113P61574 RNU6-1326P-201ENST00000391262 107 ntBASIC-1.99□□□□□ -2.73
HERVK_113P61574 Y_RNA.134-201ENST00000363435 105 ntBASIC-2□□□□□ -2.73
HERVK_113P61574 Y_RNA.68-201ENST00000362881 102 ntBASIC-2.01□□□□□ -2.73
HERVK_113P61574 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.01□□□□□ -2.73
HERVK_113P61574 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.01□□□□□ -2.73
HERVK_113P61574 MIR3139-201ENST00000579145 76 ntBASIC-2.01□□□□□ -2.73
HERVK_113P61574 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.02□□□□□ -2.73
HERVK_113P61574 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.02□□□□□ -2.73
HERVK_113P61574 RNU6-808P-201ENST00000391233 108 ntBASIC-2.02□□□□□ -2.73
HERVK_113P61574 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.03□□□□□ -2.73
HERVK_113P61574 MIR7111-201ENST00000619751 72 ntBASIC-2.03□□□□□ -2.73
HERVK_113P61574 RNA5SP224-201ENST00000365069 126 ntBASIC-2.04□□□□□ -2.74
HERVK_113P61574 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.06□□□□□ -2.74
HERVK_113P61574 RNU6-614P-201ENST00000384369 107 ntBASIC-2.06□□□□□ -2.74
HERVK_113P61574 U6.59-201ENST00000615686 107 ntBASIC-2.06□□□□□ -2.74
HERVK_113P61574 RNY4P9-201ENST00000363194 97 ntBASIC-2.07□□□□□ -2.74
HERVK_113P61574 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.07□□□□□ -2.74
HERVK_113P61574 RNU6-930P-201ENST00000390938 100 ntBASIC-2.09□□□□□ -2.74
HERVK_113P61574 RNU6-788P-201ENST00000390967 104 ntBASIC-2.09□□□□□ -2.74
HERVK_113P61574 MIR548F3-201ENST00000408509 87 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 190.2 ms